Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04703 ATGGAACACAATATCAAAACCCACCTTCCCATTCACACCATTCTATCAAACTCACCTCCATCTTCTTCTTCTTCACCCCCTTTACAATCTCCCAAACCTTTTCCTTCATTGCTCTCTCAATATTCTCCTCCTTCCGCTACGGCCACGGCTGCCGCTCCTCCTCAACCTCCTTCTCCTCCCCCACCAATTGTTGTTAGCCCTTGTGCTGCTTGCAAGATCCTTCGTCGTAGGTGTGTCGAAAAGTGTGTGTTGGCTCCTTATTTTCCCCCAACCGATCCACTCAAGTTCACTATTGCTCATAGAGTCTTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTACCTGAACCTCAAAGAGCAGATGCAGTGAGCAGCATGGTATATGAAGCAAATGCTAGAATAAGGGACCCAGTGTATGGTTGTGCAGGTGCAATATGTCAACTTCAAAAGCAAGTTAGTGAGCTACAAACACAGCTAGCCAAAGCACAAGCTGAGCTAGTCAACATGCATTGCCAACAAGCAAATCTAGTAGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCATCATCATCATCACAAGACCATAACATGATAATCAATCAACCTCAGCCGCATGTCGACATGAGTTGCTTCTTAGAAGACAACAATTTTGGGTCTGCTTGGGAGCCTCTTTGGACATGA 690 0.4522 MEHNIKTHLPIHTILSNSPPSSSSSPPLQSPKPFPSLLSQYSPPSATATAAAPPQPPSPPPPIVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPSSSSQDHNMIINQPQPHVDMSCFLEDNNFGSAWEPLWT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04703 229 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Vivi1g04703 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 66 201 - -
Vivi1g04703 229 Pfam Lateral organ boundaries (LOB) domain 67 164 IPR004883 -
Vivi1g04703 229 MobiDBLite consensus disorder prediction 34 48 - -
Vivi1g04703 229 Coils Coil 146 173 - -
Vivi1g04703 229 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04703 Vivi-Chr1 100748236 100750084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04703 63 229 AS2 family AT1G07900 64.972 2.21e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi1g04703 LOB 6.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04703 - - gmx:100806667 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04703 1 100748236 100750084 Vivi1g04703 1 100748236 100750084 ECH