Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04669 ATGTTTGGGAAACAGTTGGGTTCATCTCTTCTGACTATTGATTCTTCTGCACAGTTCTTCTGTTGCAAGGCTGATTTTGCTGCTGCATCTTCAAGTATTCAATTATCAAATACCAGATATTCTTGCAGATCTTCGCCAAGTATTACGAAGGTTAAATGGACCTCAAAATCAAATAGGTCTACCAACCATTGGATATTACATTCTACAGCACAGATAGACAATACAATCACAAGCAATGAAGATCGAAGTATGTGGGAAGCATGTAAACAATCTCTTTCCGCGTTTAACTTCAGCGAAGAAGAAAAGGACAAGATACTCGGAAAAGCATTTGGTTTTGTTCATTCTCCTTATTGGGGAGAAGATCGTAAGAAGGAAGTTCCCAAATCTGAGACAGTTAATGCAACATTAGAATATCTAAAGAGTTTAAATCTCTCCGACGATGATCTTTCCAAGTTACTCAAAAAATTTCCCGAAGTTCTCGGATGTAATATAGAGGAAGATTTGAAAGCTAATATCAAGATCCTGAAAGAGCAGTGGAGCATTGAAGGAAAATCTCTCAGGAGCCTTCTCCTTCGAAATCCAAAAGTTTTGGGTTATAATATTGATTGTAAAGGCGACTGTATGGCACAGTGCACCAGATGCTGGGTTCGATTCTAG 657 0.3836 MFGKQLGSSLLTIDSSAQFFCCKADFAAASSSIQLSNTRYSCRSSPSITKVKWTSKSNRSTNHWILHSTAQIDNTITSNEDRSMWEACKQSLSAFNFSEEEKDKILGKAFGFVHSPYWGEDRKKEVPKSETVNATLEYLKSLNLSDDDLSKLLKKFPEVLGCNIEEDLKANIKILKEQWSIEGKSLRSLLLRNPKVLGYNIDCKGDCMAQCTRCWVRF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04669 218 Gene3D Transcription termination factor 3, mitochondrial 85 214 IPR038538 -
Vivi1g04669 218 Pfam mTERF 129 200 IPR003690 GO:0003690|GO:0006355
Vivi1g04669 218 FunFam uncharacterized protein LOC106769908 68 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04669 Vivi-Chr1 99859275 99861628 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1g04669 mTERF 8.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04669 - - mtr:25484965 345.895