Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04657 ATGGGAGTTTCTTCACAAACTTCTTTTGATGCAATCACTTTGGAAGAAGCTCTTCAAGGAAGTAACAATTCATCATACTTGTGGAGCAAGAAAAGGGTGAAGAGGTCAAGAAGAATTTTCATGAAGAGAAGGGTTGGTTGTAGAAGAGGCTCCTATGGAATTCAGAGACGTGTGAGGACATTGAAGAGACTTATACCAAATAGTGATGAGTCTATTGGGTTGGAGGGACTTTTTAGAGAGACAGCTAATTATATATTGTCTTTAGAAAATAGAGTGAGGGTTATGAAGGTTATGGTTGAGGTATTGAATGGGTCTGATGAGTGA 324 0.3858 MGVSSQTSFDAITLEEALQGSNNSSYLWSKKRVKRSRRIFMKRRVGCRRGSYGIQRRVRTLKRLIPNSDESIGLEGLFRETANYILSLENRVRVMKVMVEVLNGSDE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04657 107 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 28 102 IPR044660 GO:0006355
Vivi1g04657 107 CDD bHLH_AtIBH1_like 43 99 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04657 17 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 42.857 2.25e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04657 - - vum:124832498 123.25