Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04645 ATGGAAGGAAACTCTGATAATGATGGTGGCCGCATCAACTTAACAAATCTTGCACCGGTCCCACCGGAACAATCCGGCGAAGGTTTACCTTACGCACCGGAAAACTTCCCCAATCCCGGCGACATTTGGCGCTGGAAAGCAGGCAAGAGAATTTCGTCTAACGGTAACTATCGGGACCGGTATCTTTATCTTCCTCGTCGTCTTGCTGCCTCTTACCGCGGTGGTGGATTTCCAAGCAAGCTCGCGGCTGAACGCTACGTCAAAGAATCGTTCCCTCGTGTTAATATCGCTGATTTCTTCGCTTCCTTCAGCTGGAGCATTCCTTCTGGTCTACCTGGCAATATGAATCCTGTAGCTGATGGGGGTCTTCGTCAGTTAGAATTAAAACAGCAGCCAGAATCTGATTTTGACATTGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTAATTTTGGAAGAAGAAAAAGAAAACTCATCAGTGACACCATGTGATATCTGCTGCGTCGAACCTAAATTTTGCCGTGAATGTTGCTGCATTCTTTGTTACAAAACAGTTGATTCAGCTTATGGTGGCTATAGTTACATCATGTGCAAAGTAAAACTAGGCAATAATATTTGCGGCCATGTGTGTCATCTGGAATGCGCTCTTCGATCTTATTCGGCTGGCACTGTTGGAGGAACGATTGGATTGGATGCTGAGTATTTTTGTTGGCGCTGTGATGGGAGGACTGAACTGATTTCTCATGCAAATAAGCTTCTACAGACATGTGAAGCTATTGAAACAGACGGTGCTGATATTAAGGAGAAAATTCTAACGCTTGGTATTTGCCTCTTGCGTGGTTCAGAGAAAGTCGCTGCAAAGGAGCTTCTGAGTCTTATTGCATTGGCTTCGTTAAAGCTTAAACATGGGACTAATACTGAAGATAGCCTGAAAGCTGATGACAATTTTGCAGCTACTTCTTCAGGTTCTTCCGGTAACGGCACTGCTACCACTGATACAACAGATGATGAAGGTCCTTTAAAGAATTTCAATGTTCAAAAAGGAACAAAATCTTTTCATTATCAATCCGAGTTATTAAAACTTGATGCTGAGTTTGATAAAACTATGGAGGATCTTGAAAAATCACATAAGTATGAGTATAAGCTGGCAGAGGAAAGGCTTCATACACATAAGAAATATTTACTAAATATTTCTCAGCAACTGGATAAAGAGAAGTCTGAGTTAGCAAGCGAAACCAACTCATCTCGTTCAAGTGTCTTGCTTCAAACTGTCGAGAAAAGAAATGAACAGCTAAGGCAAGAACTGAAGAAATTTGAAGAAATGAAGAAGGTAGCTAATGGTTTTGGCAGCACATCCAAAGAAAGTTTAGAAAAGCACTTTGGCTTGTAA 1395 0.4208 MEGNSDNDGGRINLTNLAPVPPEQSGEGLPYAPENFPNPGDIWRWKAGKRISSNGNYRDRYLYLPRRLAASYRGGGFPSKLAAERYVKESFPRVNIADFFASFSWSIPSGLPGNMNPVADGGLRQLELKQQPESDFDIGGCKAGNKTCSSLILEEEKENSSVTPCDICCVEPKFCRECCCILCYKTVDSAYGGYSYIMCKVKLGNNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHANKLLQTCEAIETDGADIKEKILTLGICLLRGSEKVAAKELLSLIALASLKLKHGTNTEDSLKADDNFAATSSGSSGNGTATTDTTDDEGPLKNFNVQKGTKSFHYQSELLKLDAEFDKTMEDLEKSHKYEYKLAEERLHTHKKYLLNISQQLDKEKSELASETNSSRSSVLLQTVEKRNEQLRQELKKFEEMKKVANGFGSTSKESLEKHFGL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04645 464 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g04645 464 MobiDBLite consensus disorder prediction 317 343 - -
Vivi1g04645 464 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 15 464 - -
Vivi1g04645 464 Coils Coil 423 443 - -
Vivi1g04645 464 Pfam PHD - plant homeodomain finger protein 144 276 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04645 Vivi-Chr1 99167217 99170807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04645 174 303 PHD Gene Family AT5G57380 33.077 3.80e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04645 - - psat:127092568 732.25