Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04644 ATGGAAGGAAACTCTGATAATGATGGTGGCCGCATCAACTTAACAAATCTTGCACCGGTCCCACCGGAACAATCCGGCGAAGGTTTACCTTACGCACCGGAAAACTTCCCCAATCCCGGCGACATTTGGCGCTGGAAAGCAGGCAAGAGAATTTCGTCTAACGGTAACTATCGGGACCGGTATCTTTATCTTCCTCGTCGTCTTGCTGCCTCTTACCGCGGTGGTGGATTTCCAAGCAAGCTCGCGGCTGAACGCTACGTCAAAGAATCGTTCCCTCGTGTTAATATCGCTGATTTCTTCGCTTCCTTCAGCTGGAGCATTCCTTCTGGTCTACCTGGCAATATGAATCCTGTAGCTGATGGGGGTCTTCGTCAGTTAGAATTAAAACAGCAGCCAGAATCTGATTTTGACATTGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTAATTTTGGAAGAAGAAAAAGAAAACTCATCAGTGACACCATGTGATATCTGCTGCGTCGAACCTAAATTTTGCCGTGAATGTTGCTGCATTCTTTGTTACAAAACAGTTGATTCAGCTTATGGTGGCTATAGTTACATCATGTGCAAAGTAAAACTAGGCAATAATATTTGCGGCCATGTGTGTCATCTGGAATGCGCTCTTCGATCTTATTCGGCTGGCACTGTTGGAGGAACGATTGGATTGGATGCTGAGTATTTTTGTTGGCGCTGTGATGGGAGGACTGAACTGATTTCTCATGCAAATAAGCTTCTACAGACATGTGAAGCTATTGAAACAGACGGTGCTGATATTAAGGAGAAAATTCTAACGCTTGGTATTTGCCTCTTGCGTGGTTCAGAGAAAGTCGCTGCAAAGGAGCTTCTGAGTCTTATTGCATTGGCTTCGTTAAAGCTTAAACATGGGACTAATACTGAAGATAGCCTGAAAGCTGATGACAATTTTGCAGCTACTTCTTCAGATGATGAAGGTCCTTTAAAGAATTTCAATGTTCAAAAAGGAACAAAATCTTTTCATTATCAATCCGAGTTATTAAAACTTGATGCTGAGTTTGATAAAACTATGGAGGATCTTGAAAAATCACATAAGTATGAGTATAAGCTGGCAGAGGAAAGGCTTCATACACATAAGAAATATTTACTAAATATTTCTCAGCAACTGGATAAAGAGAAGTCTGAGTTAGCAAGCGAAACCAACTCATCTCGTTCAAGTGTCTTGCTTCAAACTGTCGAGAAAAGAAATGAACAGCTAAGGCAAGAACTGAAGAAATTTGAAGAAATGAAGAAGGTAGCTAATGGTTTTGGCAGCACATCCAAAGAAAGTTTAGAAAAGCACTTTGGCTTGTAA 1356 0.4181 MEGNSDNDGGRINLTNLAPVPPEQSGEGLPYAPENFPNPGDIWRWKAGKRISSNGNYRDRYLYLPRRLAASYRGGGFPSKLAAERYVKESFPRVNIADFFASFSWSIPSGLPGNMNPVADGGLRQLELKQQPESDFDIGGCKAGNKTCSSLILEEEKENSSVTPCDICCVEPKFCRECCCILCYKTVDSAYGGYSYIMCKVKLGNNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHANKLLQTCEAIETDGADIKEKILTLGICLLRGSEKVAAKELLSLIALASLKLKHGTNTEDSLKADDNFAATSSDDEGPLKNFNVQKGTKSFHYQSELLKLDAEFDKTMEDLEKSHKYEYKLAEERLHTHKKYLLNISQQLDKEKSELASETNSSRSSVLLQTVEKRNEQLRQELKKFEEMKKVANGFGSTSKESLEKHFGL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04644 451 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g04644 451 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 15 451 - -
Vivi1g04644 451 Pfam PHD - plant homeodomain finger protein 144 276 IPR032881 -
Vivi1g04644 451 Coils Coil 410 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04644 Vivi-Chr1 99167217 99170807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04644 174 303 PHD Gene Family AT5G57380 33.077 4.04e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04644 - - psat:127092568 727.628