Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04642 ATGGAGCCTCTCTCTTCCACCAAACAAATCAATAATAATATAACCAAGCCTTCTTCTCTCCATGTCGAAACACCACCTCTTGAACCAAGTCCCCTCCGTAAAATCATGGTGGTTGCATCCATCGCAGCCGGTGTTCAATTCGGCTGGGCCCTACAACTATCTCTTTTAACTCCCTACGTCCAGCTCCTCGGTATCCCTCACACCTGGGCCGCTTACATTTGGCTCTGCGGCCCAATTTCCGGTATGCTCGTCCAGCCTATAGTCGGTTACCACAGCGACCGTTGCACTTCCCGCTTCGGTCGCCGTCGTCCGTTTATAGCTGCAGGCTCAATCGCCGTCGCTATCGCCGTCTTCCTTATCGGCTACGCCGCTGACCTCGGTCATTCCTTCGGCGACAACCTCGACAAAAAAGTCCGTCCCCGAGCAATTGGAATCTTCGTCGTTGGATTCTGGATTCTCGACGTCGCTAACAATATGCTTCAGGGACCATGCCGTGCACTTCTCGGCGACCTCTGCGCCGGTAACCAAAGGAAAACGAGAAACGCTAACGCGTTTTTCTCGTTCTTCATGGCGGTTGGTAACGTCCTTGGTTATGCTGCCGGTGCTTACAGTAAACTCTATCACGTGTTTCCGTTCACCAAAACAAAAGCATGTGATGTTTACTGTGCGAACTTGAAAAGCTGTTTCTTCCTTTCAATCGCGCTTTTGACAGTTTTAGCAACTTCCGCTTTGATCTACGTGAAGGAAACTGTTCTTACGCCGGAGAAAACCGTTGTAACGACGGAAGACGGTGGTTCAAGCGGTGGCATGCCGTGTTTTGGGCAGTTATCGGGTGCTTTCAAAGAACTAAAGAGACCCATGTGGATCTTACTATTGGTGACGTGTCTTAATTGGATTGCGTGGTTTCCTTTCCTCTTGTTTGATACTGATTGGATGGGGAAAGAGGTTTATGGAGGAACGGTTGGGGAAGGTCATGCGTATGATATGGGTGTGCGCGCGGGTGCTTTAGGACTCATGTTAAACTCAGTCGTTTTGGGTGCCACGTCACTGGGTGTTGATGTCTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTGTGGGGAATCGTTAACTTCTTGCTCGCAATTTGTTTGGGTTTGACCGTTTTGGTTACTAAATTAGCCCAACATTCGCGACAATACGCCCCCGGTACCGGTGGTTTACAAGACCCTCTTCCACCTTCCGGCGGTATCAAGGCCGGCGCGTTAACTCTCTTCTCCGTTCTCGGAATTCCACTCGCGATTACTTATAGTATACCCTTTGCTCTAGCATCTATATTCTCTAGCACCTCAGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTTAATCTTGCAATTGTTATACCACAGATGTTTGTCTCTGTTTTGAGTGGACCATGGGATGCTCTATTTGGAGGTGGCAACTTGCCGGCGTTTGTGGTGGGTGCGGTGGCGGCTCTAGCAAGTGGCATACTATCTATAATCTTACTGCCATCTCCACCACCAGATATGGCCAAGTCTGTATCAGCTACTGGAGGAGGCTTTCATTAA 1566 0.4994 MEPLSSTKQINNNITKPSSLHVETPPLEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSIAVAIAVFLIGYAADLGHSFGDNLDKKVRPRAIGIFVVGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNVLGYAAGAYSKLYHVFPFTKTKACDVYCANLKSCFFLSIALLTVLATSALIYVKETVLTPEKTVVTTEDGGSSGGMPCFGQLSGAFKELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGHAYDMGVRAGALGLMLNSVVLGATSLGVDVLARGVGGVKRLWGIVNFLLAICLGLTVLVTKLAQHSRQYAPGTGGLQDPLPPSGGIKAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSIILLPSPPPDMAKSVSATGGGFH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04642 521 FunFam Sucrose transport protein 29 502 - -
Vivi1g04642 521 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1g04642 521 CDD MFS_SLC45_SUC 35 497 - -
Vivi1g04642 521 PANTHER SUGAR TRANSPORTER 32 501 - -
Vivi1g04642 521 Gene3D MFS general substrate transporter like domains 33 256 IPR036259 -
Vivi1g04642 521 Pfam MFS/sugar transport protein 43 300 - -
Vivi1g04642 521 NCBIfam sucrose/proton symporter 31 507 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi1g04642 521 SUPERFAMILY MFS general substrate transporter 34 507 IPR036259 -
Vivi1g04642 521 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04642 Vivi-Chr1 99135823 99138848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04642 18 521 Sucrose Transporter Gene Family AT1G22710 68.750 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04642 K15378 - gmx:547679 869.381