Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04491 ATGCTTTCTCACACTCTATTCATCCTCCATTTCTTTCTCTTCATCACTTTCATTCTCCCTTCACTTTCTCTCCCTTCACAAAACGTCACACTCTTTGGTGATGCTTCTTTCACAGACACCGCCATTACTCTCACCAAACAAAAACTCACTTGTCTTCCTTCTTCAACTTCTGGAACAGGAAGAGCTTTCTACCTCTACCCTGTTCGTTTTCTTGATCCTTTAACAAACTCAACCGCTTCTTTTTCATGTCGTTTCTCTTTCTCAATCCATTCATCACCTTCTTGCCCTTCTTTTTCTGGTGACGGCATTGCCTTTCTCATTTCTTCAACCACTGAATCCTCGTCTCCCTCTAATGGTTACATGGGCCTTCCGAGTTCGGACAAAGATTCTTACTTTGCGGTTGAATTCGACACGAGCTTTGATCCTTCTCTTGGTGACATTAATGGTAACCATGTTGGTATTGATCTTAGCAGTGTTGTTTCTTTTGCTTCTGTTGATGTTCTTTCACGTGGGGTTGATTTGAAAAGTGGGAAAATCATCACTGCATGGATTGAGTATCGAGATGACATGAAAATGGTTCGTGTTTGGGTTGGTTATTCGTCAACTAGGCCACCAACACCGATTCTTGCATCACTCGTTGATGTTTCTGAGAGATTCAAAGAGTTTATGCATGTTGGTTTCTCGGCTTCTAATGGAAAAGGTTCGAGTATTCACCTTGTTCATCATTGGCAGTTCAAAACTTTGAGTTATTCTTATTCTAATAGTCCTATGGATAATTTAGAAGAAGGTGATTGTTTCTTGTGCTATGCCGGCGATTTGAAAGCGTCGAAGAAAAAAGGTGAAAATTTTCAAGGGAAAAATATTGGTGATTTAGCTCTTGGAATTGGTGGAATAACAGCTTTTGTTGTGTCAGCATTGGCATTAGTTCTTGTGATATGTGTTTACATGAAAAGGAAAAAGGGGGGTGTGATTAGAAAGATTAGAGAAGGACAGAGTTGTAGATTTCAAACAAATAAAGTTCCAATGAGGTTAGCACTTTCAGAGATAACATCAGCTACAATGGGGTTTAACAGAGCTAGACTAGTTGGTGAAGGTGCATCTGCAAAAGTTTATAAAGGGTCACTTCCATTTGGAGGTGATGTAGCTGTGAAGAGATTCGAAAAAATGGATGATTTGGACTGTTTACACAATCCTTTCGCAACCGAGTTCGCTACAATGGTTGGTTGCTTGCGGCACAAGAATCTGGTTCAGCTCAAGGGATGGTGCTGTGAAGAGAATGAATTGGTTTTGGTTTATGAGTATCTACCTAATGGAAGCCTTGATAAAGTTCTGCATAAAAATTTAAGATCTTCATTTGTGCTTTCGTGGAAACAAAGGGTTAATATAATTCTTGGCGTCGCGGCTGCTCTTACTTATCTCCATGAAGAATGTGAGAGACAGATCATTCATAGAGATGTGAAGACATGTAACATAATGCTTGATGTAGATTTCAATGCGAAACTTGGCGATTTCGGGCTTGCAGAAGTGTATGAACATAGTTCTAGCACAAGGGATGCTACTATACCAGCAGGAACAATGGGGTATCTAGCACCGGAATACGTTTATACCGGGATTCCTACCGTGAAGACCGATGTGTATAGTTTCGGAGTCGTGGTGATTGAAGTCGCGACAGGGAGGAAACCCGTTGGAGACGACGGAACTGTCGTTGGCGACTATGTTTGGAAGCTGTGGGAAAAGAATAGACTTGTGGACGCGGCGGATCCGAAATTGATGGGGGAATTCGATATCGTTGAGATGGAAAGAGTGTTATTGGTAGGGCTTGTTTGTGTTCATCCTGATAATGAGAAGAGGCCTAGAGTGAGGGATGCAGCTAGAATGATTAAGAATGAAGCATCAGTTCCTTTGTTGCCACCATGTAAACCAAGGGTGAGGATTAGGCCTATTTGTTTTAATGAAACACAGAATTTTGGTGATGATTGGGTTAGTAATGATGAAGCTCTTTATATGACTCCTAGAAGCCAGTTTTACTAG 2031 0.4106 MLSHTLFILHFFLFITFILPSLSLPSQNVTLFGDASFTDTAITLTKQKLTCLPSSTSGTGRAFYLYPVRFLDPLTNSTASFSCRFSFSIHSSPSCPSFSGDGIAFLISSTTESSSPSNGYMGLPSSDKDSYFAVEFDTSFDPSLGDINGNHVGIDLSSVVSFASVDVLSRGVDLKSGKIITAWIEYRDDMKMVRVWVGYSSTRPPTPILASLVDVSERFKEFMHVGFSASNGKGSSIHLVHHWQFKTLSYSYSNSPMDNLEEGDCFLCYAGDLKASKKKGENFQGKNIGDLALGIGGITAFVVSALALVLVICVYMKRKKGGVIRKIREGQSCRFQTNKVPMRLALSEITSATMGFNRARLVGEGASAKVYKGSLPFGGDVAVKRFEKMDDLDCLHNPFATEFATMVGCLRHKNLVQLKGWCCEENELVLVYEYLPNGSLDKVLHKNLRSSFVLSWKQRVNIILGVAAALTYLHEECERQIIHRDVKTCNIMLDVDFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYTGIPTVKTDVYSFGVVVIEVATGRKPVGDDGTVVGDYVWKLWEKNRLVDAADPKLMGEFDIVEMERVLLVGLVCVHPDNEKRPRVRDAARMIKNEASVPLLPPCKPRVRIRPICFNETQNFGDDWVSNDEALYMTPRSQFY 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04491 676 CDD STKc_IRAK 362 629 - -
Vivi1g04491 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 16 246 IPR013320 -
Vivi1g04491 676 Gene3D Transferase(Phosphotransferase) domain 1 435 633 - -
Vivi1g04491 676 ProSiteProfiles Protein kinase domain profile. 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04491 676 SMART serkin_6 356 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04491 676 Gene3D - 14 257 - -
Vivi1g04491 676 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Vivi1g04491 676 FunFam L-type lectin-domain containing receptor kinase VIII.1 435 645 - -
Vivi1g04491 676 PANTHER - 41 637 - -
Vivi1g04491 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Vivi1g04491 676 Pfam Legume lectin domain 16 248 IPR001220 GO:0030246
Vivi1g04491 676 SUPERFAMILY Protein kinase-like (PK-like) 342 644 IPR011009 -
Vivi1g04491 676 Pfam Protein kinase domain 357 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04491 676 FunFam L-type lectin-domain containing receptor kinase S.6 318 434 - -
Vivi1g04491 676 Gene3D Phosphorylase Kinase; domain 1 319 434 - -
Vivi1g04491 676 CDD lectin_legume_LecRK_Arcelin_ConA 17 247 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04491 Vivi-Chr1 95563112 95565310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04491 4 675 Receptor kinase-like Gene Family AT5G42120 54.806 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi1g04491 Pkinase 3.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04491 - - gmx:100783805 909.442