Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04490 ATGGAGAGTGTTTGTCTCAAGTGTGGCGATGTAGGTTTTATCGAGGCTATAGTTTTTTGCAACAAGTGTGAGGCTTGTGCTCTTCACAGGTACTGTTTAGATGGACCTGTGATTTTTACTGATGAAGTTATATGGTTTTGTGAGGATTGTGAACCAAAGCAAATATCGCAAAAAACTAAATTGGCAAGTTTGGCCAATTACAGAATCCAAACCCGAAGAAAACTGAAACATTGTGTAAAGAGACTGAAGGAAAGAAATCAACAGCACAAAAGGAAGATTAAAGAGAAGGGGAAGAACGGAAAAGTTAAATCTGGCATGCATAATATCAGCCATGAACAAGAAACTGAATCTAAAAATGAGTGTGAACCAGTTCCATCAAATTCACCAAATAGCAACGTTGTTCCTGAATCTATTCAAATCTCTCAAGTTACTGTCACTGATGATTTAATTCCTTTGGAAGTTCATGTTGATGCACAACCGATTGCAGAACCAATATGGAGGGGAAACTTGCTCTTCTGTGATAAAAGTAAAACTACCGGTACTGTCAAACTTCTGGCCCATTTGTCCAGTTTAGCATCCCCCAAAGTTCTGGAGGAGGTTGATCTTTTCCCAGAAGTGCTTTCCGCTGATTTGCTTCCCAGATCTGCGGTGTGGCCTACTAGCTTCAAGAAGAAAGGACCAACTGATAAGAGCATTGCTCTTTATTTCTTTCCTGTAAATGAAAGTGTCTTTGATAAGCTGGTTGATGATATCATTCGGACTGAAGAGGCCGTAAGAGTTGTGACCGAAAATGCAGTGCTTTTAATTTTTCCTTCCACCTTGCTTCCAATCCAACATCAGAGGTTTCAATCCAAACATTACTTGTGGGGTGTCTTCAAGAAAAAGCAAACTTCACTCGAGGCAAATGATGCTGTGAGCTGA 921 0.4007 MESVCLKCGDVGFIEAIVFCNKCEACALHRYCLDGPVIFTDEVIWFCEDCEPKQISQKTKLASLANYRIQTRRKLKHCVKRLKERNQQHKRKIKEKGKNGKVKSGMHNISHEQETESKNECEPVPSNSPNSNVVPESIQISQVTVTDDLIPLEVHVDAQPIAEPIWRGNLLFCDKSKTTGTVKLLAHLSSLASPKVLEEVDLFPEVLSADLLPRSAVWPTSFKKKGPTDKSIALYFFPVNESVFDKLVDDIIRTEEAVRVVTENAVLLIFPSTLLPIQHQRFQSKHYLWGVFKKKQTSLEANDAVS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04490 306 MobiDBLite consensus disorder prediction 85 133 - -
Vivi1g04490 306 PANTHER - 1 134 - -
Vivi1g04490 306 SUPERFAMILY FYVE/PHD zinc finger 2 60 IPR011011 -
Vivi1g04490 306 MobiDBLite consensus disorder prediction 99 119 - -
Vivi1g04490 306 Coils Coil 72 99 - -
Vivi1g04490 306 ProSitePatterns Zinc finger PHD-type signature. 5 50 IPR019786 -
Vivi1g04490 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 76 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04490 Vivi-Chr1 95556293 95559009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04490 2 74 C2H2 Transcription Factor Family AT3G01460 31.507 5.89e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04490 - - mtr:11424150 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05187 2 174573762 174578205 Vivi1g04490 1 95556293 95559009 PCT