Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04468 ATGAAACGTTGGATTGTTGAGCATGAAAACAAACATGCTATGTATTCTTTATTGTGTGTTACTGGATTGAACCTTGGATTTAGAACATGGGCTATTAATTATCTATCTAATAGGAAATCTAATTATCGGATGGTGATAGAACTCACGAAACTAGTCTTTCATTCCATAGACCCTGAAGTCTCATTAGAGAATTTTCCTTACCATTTAAGTGAAAAAACCAAAATCTTGTTGATAAGTGCTGGATATGTTCATTTAACACAACAGCAATTATACAAGCATGCGAATAATCTTTCGCCGATAAACCGAGCTATTTTGCTTTCTGGACCTGGAGTTTGTGAAGAATTCTATCAGCATTGTCTTGCTAAAGCTTTAGCACATAATTTCGAATCGAAGATGCTGTTTCTGGATTTGAATGACTTGTCTGCAAAGATGCATGACACATACGGATGTTCTGCGACAGGAGTAGTCCTACTCGACGAGACTCTGGAGCGTGTGTCTGGTTTATTTGGTTCGCTATCAACGCTCTCGTCAAAGCTTTATAAGAATGCCTCTAGCGCATCTAAACCAGATCATACTAGAACTCCTAAGAAGTGCGTAAGACGCTTCTGTTTCGAAGAAAAGCATTTACTAGATTCACTCTACAGGGTCTTGGTTTCTATATCAAAAACTGGTCCGGTTATTTTATACATCAAGAATGTCGAGGAGATCTTTCTTCGATCACGAAGTATGTACAGTTTGTTCAAAAAGCTATTCGATAAACTTTCAGGACCAGTGTTGATACTCGGTTCCCGAACTTATGATTCAAACGATGAAGGTATAAGAGTTGATAAAAAACTCACTAGGCTATTCCCTTACAACATTGAGATCAAACCGCCTCAAGATGCGACTAGTAACAGACTCTGGAAAGACCATATAGAAGATGCTGAGAAAAAGGAACAGTTGCGAAATAACACAAACTACATTGTTGAAGTGCTTGCGGAAAATGACATTGATTGCGATGACTTGAACTCAATCAGCTATGATGATGTTATGCTACTCAGAAATCACATCAAAGAGATCGCAGCATCTGCGATATTTTATCAGTTGATGGTTAACAAACAGCCCGAGTACCGAAATGGGAAGCTAATTATGTCAGCTAAGAGTTTGTGCCATGTATCGAGTGTGTTCCAAGATGGTGAGAGTATTGCGAAGGATAAAAACGACACTAAAGAATCAAAGAATGTAGCTTCTGACAACGCCTATGAGAAGATCATAAGGCAAGAGCTTATCCCTGCAAATAAGATAGAGGTGTGTTTTTCGGATATTGGTGCATTGGATGATGTTAAAGAATCACTTCACGAATCGGTTATGCTTCCTCTTAGAAGACCAGATCTATTCAAGCGCGGTGGGATATTGAAGCCGTGTAAAGGCGTATTGCTTTTTGGACCTCCCGGTACAGGAAAAACAATGCTCGCGAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATCTCTCTTCGTCTACCATCACTGATATGTGGTATGGAAATAGTGAAAAGAATGTTCGAGCTGTGTTTACATTAGCGGCAAAGGTTGCCCCGACTATTATTTTCATTGATGAAGTCGATAGCTTGCTTGGGAGTCGTAGTACGAATGAGCAAAGCGTTGGGAGAAGGATTAAAAATGAATTCATGTCCCATTGGGATGGACTATTGTCAAAACCTGATGAGAAAATTACTGTGCTTGGTGCCACTAACTTGCCATTTGGCCTTGATGAAGCAGTTATAAGACGGTTTCATCGCAGGATCATGGTTGGTCTTCCGTCTGCTGAAAACCGAGAAGCGATCTTGAAAACTCTTCTAGCTAAGGAAAAACATGAAGATATAGACTTCAAAGAGCTTTCAGCTATGACAGAAGGATATAGTGGGAGTGATCTTAAGAACTTGTGCAATACCGCAGCATATCGCCCCATTAAGGAGCTAATGGAACAGGAGAAGGAACAAGAAATGAAAAAGAGGAAAAAGTTGGCAGAAGTTGAAAACTCGAAAGATGCTTCCGATCCTATAGAAGAAGATCATGTGATTGTCCCCAGGCCATTAAACATGGAAGACATAAGAGAAGCAAAGAATAAGGTGACTGCAAGCTATGCTGCAGAAGGATCAAATATGAAAATGCTAGAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAAGAGATGCTCACTTATTTTATTTAG 2232 0.397 MKRWIVEHENKHAMYSLLCVTGLNLGFRTWAINYLSNRKSNYRMVIELTKLVFHSIDPEVSLENFPYHLSEKTKILLISAGYVHLTQQQLYKHANNLSPINRAILLSGPGVCEEFYQHCLAKALAHNFESKMLFLDLNDLSAKMHDTYGCSATGVVLLDETLERVSGLFGSLSTLSSKLYKNASSASKPDHTRTPKKCVRRFCFEEKHLLDSLYRVLVSISKTGPVILYIKNVEEIFLRSRSMYSLFKKLFDKLSGPVLILGSRTYDSNDEGIRVDKKLTRLFPYNIEIKPPQDATSNRLWKDHIEDAEKKEQLRNNTNYIVEVLAENDIDCDDLNSISYDDVMLLRNHIKEIAASAIFYQLMVNKQPEYRNGKLIMSAKSLCHVSSVFQDGESIAKDKNDTKESKNVASDNAYEKIIRQELIPANKIEVCFSDIGALDDVKESLHESVMLPLRRPDLFKRGGILKPCKGVLLFGPPGTGKTMLAKAIANEAGASFINLSSSTITDMWYGNSEKNVRAVFTLAAKVAPTIIFIDEVDSLLGSRSTNEQSVGRRIKNEFMSHWDGLLSKPDEKITVLGATNLPFGLDEAVIRRFHRRIMVGLPSAENREAILKTLLAKEKHEDIDFKELSAMTEGYSGSDLKNLCNTAAYRPIKELMEQEKEQEMKKRKKLAEVENSKDASDPIEEDHVIVPRPLNMEDIREAKNKVTASYAAEGSNMKMLEQWNDLYGEGGSRKKEEMLTYFI 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04468 743 Gene3D - 602 706 - -
Vivi1g04468 743 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 48 742 - -
Vivi1g04468 743 Pfam AAA+ lid domain 622 664 IPR041569 -
Vivi1g04468 743 Coils Coil 652 676 - -
Vivi1g04468 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 657 IPR027417 -
Vivi1g04468 743 ProSitePatterns AAA-protein family signature. 573 592 IPR003960 GO:0005524|GO:0016887
Vivi1g04468 743 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 429 604 - -
Vivi1g04468 743 Pfam ATPase family associated with various cellular activities (AAA) 471 600 IPR003959 GO:0005524|GO:0016887
Vivi1g04468 743 Gene3D - 429 723 IPR027417 -
Vivi1g04468 743 SMART AAA_5 467 603 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04468 Vivi-Chr1 95196190 95200013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04468 411 674 Calmodulin-binding Proteins AT3G56690 36.996 4.96e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04468 - - vvo:131649642 1454.5