Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04415 ATGCCTACATGGTGGGGAAAATCATCATCAAAAGAAACTAGGAAGAAAGCAGGTAAGGAAAGTATTATTGACACATTGCACCGAAAGTTTAAATTTCCATCTGACGGTAAATTAAGCACTAGATCTGGAGGATCTCGAAGACGAAGCAATGACACAATTTCAGAGAAAGGGGATCGGTCTCCATCCGAATCAAGATCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCACATGCTCAACCACTTCCGCTTCCTGGTATGCACCCTTCAAGTGTAGGTCGAGTTGATTCTGAAATTAGTATATCAGCAAAATCAAGACTGGAAAAGTCCTCCAAGTCATCGTTGTTTCTCCCACTTCCGAAACCTTCATGCATACGCTGCGGGACAAATCCTGCAGATTTGGATGGAGATATGGTCAACACTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGACGAGCCAGCAGACTCACGCAATCGTAGTCCTCTGGCAACTGACTCCGAAACTGGGACTAGAACTGCTGCTGGAAGTCCTTCCAGCTTGATGCTCAAGGATCAATCGTCTGCTGCTGTTGCCCAACTGAATTCCAGAGAAGTGAAAACACCGACAAACATTCTAAGTAATCACACATCTTCTACTTCACCTAAGAGAAGGCCTTTACGACACCATGTTCCAAATCTCCAGGTTCCTCCTCACGGTGTCTTCTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGTACAGATCAGGTGTTGAATTCTGCATTTTGGGCTGGAAAGCCATATCCAGAGATCAATTTCGTCGGATCTGGTCACTGCTCTAGTCCAGGTTCCGGTCACAATTCGGGGCATAATTCAATGGGAGGGGACATGTCGGGACCATTATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTACTCTCCGGTACCTAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCAAGAATCCAGAGTGGAGCTGTCACACCTATTCATCCTAGGGCAGCGGGAACATCAACCGAATCACAAACAGGATGGGTTGATGAGGGAAAACAACAGAGTCATCGCTTGCCTCTCCCTCCTTTAACGGTTACCAATACCTCACCATTCTCTCACTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGTTCACGTTGGAAAAAAGGGAAGCTGCTTGGCAGAGGCACGTTTGGACATGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTACAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAGTTAATGCAGGAAATTCATTTGTTGAGCCGTTTAAGACATCCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCCATTCGTAGTTATACTCAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTCTTCACAGGGACATCAAAGGAGCAAACATATTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATACTGTCCTTTGTCATTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTTATAAAGAATTCCAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTCTCAGTATGAAGGGGTTGCTGCCATGTTCAAAATTGGTAATAGCAAGGAGCTCCCAACAATCCCGGAACATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTACAACGTAATCCACGCGATCGCCCTTCGGCAAGTGAATTATTGGACCACCCTTTTGTTAAAGGTGCTGCACCTTTGGAAAGACCTATCATGGTTCCCGAAGCTTCAGACCCTATTTCTGGAATTACACACGGAACAAAAGCTCTGGGCATTGGACAAGGAAGAAATCTGTCTGCTTTGGATACAGATAAACTCTTCATTCATTCTTCCAGGGTTTTGAAAAGTAATCCTAATGAAAGTGAAACCCACATTCAAAGGAATATATCTTGCCCAGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACATCAGAGAAGTGGGAGATTGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCACTGGCGGCGGCAGTGGTGCCATTCCGTTCAGTAATCACTTAAAACAGTCCGTTTACTTTCAAGAGTGTCTTGGAAGCATGCCAAAATCCTCAAACTACATTAACGGCTCCTCTCACCATGACAATATCGATATTTTTCGAGGAATGCAAATCGGGTCTCACATTAAATCAGAACTCGTTTCCCCCGAAAACGATGCACTCGCACAGTTTATAAGGTCTCCTCATCCAGAGCCATATGACTTTCAATCAGTCTTGGCTGATCGTGTTGGCCGGCAGCTGCTGGGAGATCATGTTAAGATTAACCCATCATTTGATCCAAATCCCAGCTCGTCTTTGCTCAACCGAACTAATGGTTTATGA 2694 0.4458 MPTWWGKSSSKETRKKAGKESIIDTLHRKFKFPSDGKLSTRSGGSRRRSNDTISEKGDRSPSESRSPSPSKVARCQSFAERPHAQPLPLPGMHPSSVGRVDSEISISAKSRLEKSSKSSLFLPLPKPSCIRCGTNPADLDGDMVNTSVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQSSAAVAQLNSREVKTPTNILSNHTSSTSPKRRPLRHHVPNLQVPPHGVFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEINFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAAGTSTESQTGWVDEGKQQSHRLPLPPLTVTNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTMFTDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPEHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPEASDPISGITHGTKALGIGQGRNLSALDTDKLFIHSSRVLKSNPNESETHIQRNISCPVSPIGSPLLRSRSPHQRSGRLSPSPISSPRTASGASTPLTGGGSGAIPFSNHLKQSVYFQECLGSMPKSSNYINGSSHHDNIDIFRGMQIGSHIKSELVSPENDALAQFIRSPHPEPYDFQSVLADRVGRQLLGDHVKINPSFDPNPSSSLLNRTNGL 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04415 897 MobiDBLite consensus disorder prediction 9 62 - -
Vivi1g04415 897 Pfam Protein kinase domain 413 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04415 897 MobiDBLite consensus disorder prediction 287 413 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 725 782 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 165 219 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 748 782 - -
Vivi1g04415 897 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 678 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 878 897 - -
Vivi1g04415 897 CDD STKc_MEKK1_plant 411 668 - -
Vivi1g04415 897 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Vivi1g04415 897 MobiDBLite consensus disorder prediction 287 301 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 108 127 - -
Vivi1g04415 897 Gene3D Transferase(Phosphotransferase) domain 1 409 685 - -
Vivi1g04415 897 SMART serkin_6 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04415 897 MobiDBLite consensus disorder prediction 881 897 - -
Vivi1g04415 897 SUPERFAMILY Protein kinase-like (PK-like) 410 733 IPR011009 -
Vivi1g04415 897 ProSiteProfiles Protein kinase domain profile. 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04415 897 MobiDBLite consensus disorder prediction 1 102 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 371 405 - -
Vivi1g04415 897 FunFam Mitogen-activated protein kinase kinase kinase 410 692 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 132 236 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 725 740 - -
Vivi1g04415 897 MobiDBLite consensus disorder prediction 348 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04415 Vivi-Chr1 94095373 94101374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04415 1 895 MAP Kinase Kinase Kinase AT1G63700 57.586 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi1g04415 Pkinase 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04415 K20717 - gmx:100797994 1433.7