Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04393 ATGATTCAACTGTTTTCTCAGATGATGAACTTTGTTTTGACTTTTGCATTGGTGTATCTAATCACGGTGGTTCCATTACGTGTGAGCTCACAAGAAGAACAGAGGCTTCTAGTGAACATGAAGCTTGTTACAAACGCACGTGATACTAGTGCTCTTTGTTTAGATGGGAGTTTACCAGCTTATCATTTGCACAGAGGTTATGGAGCAGGGGAGAACAACTGGCTTCTACAATTTGAGGGTGGTGGATGGTGCAATGACTTGCAATCATGCTTGGAGAGAGCACAAACTTTCAGGGGTTCAACAAAGCACATGAAGAAGTTTGAGGTTTTCTCTGGTATTTTAAGCAACAATGCCACTCTTAATCCAGACTTTTACAATTGGAACCGGGTGAAACTGAGATATTGTGATGGAGCTTCATTTACAGGAAACAGAATGTTCAAAAATGAGACAACAACACTTTACTTCAAAGGGAAAAAGATTTGGGAAGCCATTATTGAGGATCTTCTACCAAAAGGATTAGGAAAAGCATACAAGGCATTGCTTTCTGGCTGCTCAGCAGGAGGTTTAGCCACCTTTCACCATTGTGACAATTTCACGAAGTATTTGCCAACAAATGCTTCCGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAACCATACTATGAGATACTTTTTTAAAAGTCTAGTTACATTGCAGGGGATAAAGCAGAACCTTAATGAAAACTGCACGAGTGCGCTTTCCGATCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAAATATATATCAACACCGTATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATCATATATTGGCGCCACCTTCAGCTGATCCCCTCGGGCACTGGAGACACTGCAAGATGAACAAATCAACATGCACACCAGCCCAAATAAATACATTGCAAGGTTTTAGGCTCAGCATGCTTGCAGCTTTGAAACCATTATACTCTTACTCAAATGGAGGGGGAATATTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGGAACATGGTTTGGAGACGATTCTCCTAGAATAAACAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTTAGTAGAAACATAAGCAAGCAAATTGACTGTCCGTATCCATGTGATAAAACTTGTCATAACTTAATACCTTAA 1212 0.3977 MIQLFSQMMNFVLTFALVYLITVVPLRVSSQEEQRLLVNMKLVTNARDTSALCLDGSLPAYHLHRGYGAGENNWLLQFEGGGWCNDLQSCLERAQTFRGSTKHMKKFEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNRMFKNETTTLYFKGKKIWEAIIEDLLPKGLGKAYKALLSGCSAGGLATFHHCDNFTKYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFFKSLVTLQGIKQNLNENCTSALSDPDLCFFPQYALKYISTPYFILNSAYDVFQFHHILAPPSADPLGHWRHCKMNKSTCTPAQINTLQGFRLSMLAALKPLYSYSNGGGIFINSCFAHCQSESQGTWFGDDSPRINKTIAEAVGDWYFSRNISKQIDCPYPCDKTCHNLIP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04393 403 PANTHER NOTUM-RELATED 18 400 IPR004963 GO:0016787
Vivi1g04393 403 Pfam Pectinacetylesterase 32 383 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04393 Vivi-Chr1 93863173 93869478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04393 6 403 Carbohydrate Esterase AT5G23870 63.092 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04393 K19882 - gmx:100802358 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04393 1 93863173 93869478 Vivi1g04393 1 93863173 93869478 ECH