Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04390 ATGGAGATGATATGGCTATGTGGCATTTTTGTTGCTATGTTAGCAACACTTTGCCTCTTGCTGCTCTTGATACTAACATTTTCTTGGTGGATTTTCCCTATCCAAATCCACAAGAAGCTTAAAAGAAATGGGTTTCAAGGGCCAACTCCAAGCTTTCCATTTGGAAACATTGAAGAGATGAAAAGAAAAAATATCATAAAATCTTCACTTGAATCCTCGAGTCTCACACATGATATTCACTCACAAGTTTTTCCCTACTTTTCTTCTTGGCAAAAATTTCATGGTAAAGTATTTGTGTATTGGCTAGGGACGGAACCATTTTTGTACATTGCAGATGCAGAATTCTTGAAGAAAATGTCAACAGAAGTGATGGCAAAGAGATGGGGAAAACCTAATGTTTTTAGAAATGATAGAGATCCAATGTTTGGAAGTGGTTTGGTTATGGTAGAAGGCAATGATTGGGTTCGTCATCGTCACATTGTTGCACCTGCATTCAATCCTATTAACCTCAAGGTGATGGCAAGCATGATGATTGAGTCTACAAATCAAATGAAAAATAAATGGACTAACCAAATAAACTTTGGCAAACTTGAAATTGATGTGGAGAAAGAAATTATAACAATAGCTGGAGAGATTATAGCAAAAACAAGTTTTGGTGTGGAAGATGAAAATGCTAAAGAGGTTTTTACCAAATTGAGAGCCTTACAAATGACTCTTTTCAACACCACTAGATATGTTGGTGTTCCCTTTGGCAAGTTTTTTAATGTCAAAAAAAATTTGGAGGCTAAGAAACTTGGCAAAGAAATAGACAAGCTCTTATTGTCAATTGTAGAATCTAGAAAAAATTCAACTAAGAAGAGTTCTCAAAAAGACTTATTAGGGTTATTGCTACAAGAAAATAATCATGTTGACCGATTGGGAAAGACATTGACATCAAGAGAAGTGGTTGATGAATGCAAAACTTTCTTTTTTGGTGGACATGAAACAACAGCACTTGCTATCACATGGACTTTGTTGCTTCTAGCCATGCATGAAGATTGGCAGAATCAATTGAGAGAAGAGATTAAAGAAGTGGTGGGAAACAATGAAATTGATATTACTATGCTTGCTGGTTTAAAGAAGATGAAGTGGGTCATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGACAAGCAAGAGAAGACATTCGAGTTGATGATGTAACAGTGCCTAACGGAACAAACATGTGGATCGATGTTGTAGCGATGCACCATGATCCTGAATTATGGGGAAAAGATGTGAATGAGTTCAAACCAGAGAGATTCATGGATGATGTGAATGGTGGATGCAAACACAAAATGGGGTATTTGCCATTTGGATTTGGAGGGAGAATGTGTGTGGGTAGAAACTTGACATTTATGGAGTACAAGATAGTATTAACAATACTTCTCTCTAATTTTACTTTTAAGGTTTCTCCAAGTTACCAACATTCACCAGCCATCATGCTCTCCCTTAGGCCTACTCATGGACTTCCACTCATTGTTGAACCCCTTAATTAG 1551 0.3688 MEMIWLCGIFVAMLATLCLLLLLILTFSWWIFPIQIHKKLKRNGFQGPTPSFPFGNIEEMKRKNIIKSSLESSSLTHDIHSQVFPYFSSWQKFHGKVFVYWLGTEPFLYIADAEFLKKMSTEVMAKRWGKPNVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKVMASMMIESTNQMKNKWTNQINFGKLEIDVEKEIITIAGEIIAKTSFGVEDENAKEVFTKLRALQMTLFNTTRYVGVPFGKFFNVKKNLEAKKLGKEIDKLLLSIVESRKNSTKKSSQKDLLGLLLQENNHVDRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLREEIKEVVGNNEIDITMLAGLKKMKWVMNEVLRLYPPAPNVQRQAREDIRVDDVTVPNGTNMWIDVVAMHHDPELWGKDVNEFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTILLSNFTFKVSPSYQHSPAIMLSLRPTHGLPLIVEPLN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04390 516 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 Pfam Cytochrome P450 81 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vivi1g04390 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 507 - -
Vivi1g04390 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 SUPERFAMILY Cytochrome P450 78 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04390 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04390 Vivi-Chr1 93733764 93736535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04390 1 515 Cytochrome P450 AT5G52400 59.693 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04390 - - gmx:100785284 855.899