Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04327 ATGGGCTTTCTCCGGCGACTCTTTGGCGCCAAAAAACCGGGTCCTCACACCGACGGTTCGTGTACCAAATCCGACAAAGACAACACCAAAAGAAGATGGACCTTCGCCAAACAAAGCAGCAGGAGAAAGTCACTTCCACCACCACAACCGCCACAACCCTCCGGCTTCTCTCAATTTGACCCCTCCGCATCCTTAGATCGGAATAAACATGCAATTGCTGTTGCGGCTGCTACTGCAGCCGTCGCCGAGGCCGCTCTCGCCACAGCACATGCTGCTGCGGAGGTTGTCAGACTGACGAGCAACGGCGTGGGAAGTAGCTCCAAAGCGCGTGGTGGTCAGCCACGGTTGCCGGAGGAAACCGCTGCCGTTAGAATACAGTCAGCTTTCCGCGGTTACTTGGCGAGGAGGGCGTTGAGAGCGCTAAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCAGATATGCTAAGGCGCATGCAAACATTGGTACGACTTCAGACACAGGCACGCGTGACTCGTGCTCACCACTTGTCATCGGATAATTTGCATTCTTTCAAGTCTTCACTTTCTCACTACCCTGTCCCTGAAGAATATGAGGACCCGCACTCACATCGTGTCTGTACAAAATTTGGTGAATCTTCCATACTCAAGAGATGTAGTTCGAATGCAAATTTTAAGAAGATTGAGTCGGAGAGAAAAAAATTTGGTGCCAACTGGTTAGACCATTGGATGCAAGATAACTCCGGTAACCATGTCAAAGATACTTCATTCAAGAATAAGCATTCTCATGACGATAAAATTGATAAGATTCTCGAAGTAGATACTTGGAAGCCACACGAGTCTCTATTAAAACACTCAACAAAACCTCAAAATCAAACTCCCTCATTCAAGTTTCACAAAGGCAAAGATCAAGAAACACCATCGCGCACGGCTGATAATAGTCCACAAACATTCTCCGCGTCTTCAAAAACCGGAAATAGCGTAAAAAGAGGCACTCCTTTTACGCCTACAAGAAGCGAATGTTCATGGAGTTTCTTAGGTGGTTACTCCGGTTACCCTAATTTCATGGCGAACACCGAATCCTCTAGAGCTAAAGTTCGATCGCAAAGTGCACCAAGACAAAGGCACGAGTTTGAGGGATACAATTACTCTAGAAAACCTTTTCAGGGTCTTTGGGAAGTAGGGTCTACTAATTCAGACCAAGATACTGATTCAAGGAGCAATAGAGTCTCACCTTCTTTGAGCCGTTTCAATAGAATTGGAAGTAACAATTTAAGGTGA 1305 0.4667 MGFLRRLFGAKKPGPHTDGSCTKSDKDNTKRRWTFAKQSSRRKSLPPPQPPQPSGFSQFDPSASLDRNKHAIAVAAATAAVAEAALATAHAAAEVVRLTSNGVGSSSKARGGQPRLPEETAAVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQTQARVTRAHHLSSDNLHSFKSSLSHYPVPEEYEDPHSHRVCTKFGESSILKRCSSNANFKKIESERKKFGANWLDHWMQDNSGNHVKDTSFKNKHSHDDKIDKILEVDTWKPHESLLKHSTKPQNQTPSFKFHKGKDQETPSRTADNSPQTFSASSKTGNSVKRGTPFTPTRSECSWSFLGGYSGYPNFMANTESSRAKVRSQSAPRQRHEFEGYNYSRKPFQGLWEVGSTNSDQDTDSRSNRVSPSLSRFNRIGSNNLR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04327 434 MobiDBLite consensus disorder prediction 316 343 - -
Vivi1g04327 434 MobiDBLite consensus disorder prediction 400 434 - -
Vivi1g04327 434 Gene3D - 118 182 - -
Vivi1g04327 434 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Vivi1g04327 434 SMART iq_5 140 161 IPR000048 GO:0005515
Vivi1g04327 434 SMART iq_5 117 139 IPR000048 GO:0005515
Vivi1g04327 434 MobiDBLite consensus disorder prediction 18 34 - -
Vivi1g04327 434 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Vivi1g04327 434 Pfam Protein of unknown function (DUF4005) 323 410 IPR025064 -
Vivi1g04327 434 MobiDBLite consensus disorder prediction 289 343 - -
Vivi1g04327 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 163 IPR027417 -
Vivi1g04327 434 PANTHER IQ-DOMAIN 5-RELATED 25 406 - -
Vivi1g04327 434 MobiDBLite consensus disorder prediction 1 62 - -
Vivi1g04327 434 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Vivi1g04327 434 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04327 Vivi-Chr1 92246210 92250467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04327 1 412 IQD Protein Family AT5G62070 43.357 8.64e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04327 - - gmx:100783694 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04327 1 92246210 92250467 Vivi1g04327 1 92246210 92250467 ECH