Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04326 ATGGATGGTGATCATAGCGAGTTAGGTAACATGCGTGAAGAAAACAATGAAGTTGGACTTGAAACTTCGAATAATTTGGACTTGAATGTGGAGCAGAACTGTTGCAGCCCAAGCATTGTTCATGCTAATGGCTCTCAATCTGGTCTCACTTCAGCAAATGCATTCTGCAGCAGCACAATATTGGGAATTGGTACGGTATTTGAATCTGATGAACATGCGTATAGAAGTTATAACAAGTATGCCAAATTGATGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTACATGGCATGGTGGTTTCTAGAAAATTTACGTGTTCCAAAGAGGGATATCGTAGGACTGATAGAAGAGATTGTAATGTGAAGAAGCATCGAAAGGAAACTAGAACTGGCTGTTTGGCACACATGATCATCACTCGTCAATCAGATGGAAAATACCATGTCACCCATTTTGAAGCACAACATAATCACGATGATGTAAATCCTAGCAATGCTAACATGTTATTACTAGACTTGCAAAATGAAATTAATGTTGCTCAAGCTGTGGAGGTTATTGACTCATATGATAGTTTGGGGCCAAAATCTAGGTCGGCATTAAAGATGATGAATAAAAAATTAGGTGCACGTGATTCTCTTGATCAACTTTCCGTGAATTATGACAATTACCTTCATTCTGTAAGGGGAAGAGATATGGCTAAAGGAGAAGCAGGGCGTTTGCTGGGTTATTTTCAAAGACAACACTTTGAAAATCCAACATTTTTTTATGCCCTACAGCTTGATGCTGAAGACAAGGTAAGCAATATATTCTGGGCTGATGATAATATGGTGGTAGATTACGATCATTTCGGGGATGTTGTTTGTTTGGATACAACTTGCAGAACAAACAAAGCTCTTCGGCCATTTGTACAGTTTTTAGGTGTTAATCATCATAAACAAGTGTTAATATTTGCTGCTGCTTTTTTGTATGATGAGACTGTTGAATCATTTAATTGGCTATTACGAACTTTTATTGGCACAATGTCTGGGAAAAAACCAAAGGCCATCATCACAGAACAAGATGCTGCAATCATCGAAGCTGTCAATACTGTTTTACCCGAAACAAAGCAGTATACATGTGTATGGCAGATGTATGAGAATACTGTGAAACACCTCAGCCATTTCGTTAAAGATGCTAAATCCTTTGCAAATGATCTAAAGTGTTGTATATATGGTCCCAAGAATGAGGAAGATTTTACTCATGCTTGGGAGGCTATGCTGGATAAATATAATCTTCATCAAAATGAATGGTTGAGATGGATGTATAGAGAAAGGGAGAAATGGGCTGTTTTCTTTGGTCAGAATACATATTTTGTAGATATCAAAGGCTTTCATTTAGGTGAGACTTTGTCTCTTAAGTTTAGAAATCATCTAAATCCCGACCTTGATGTAGTTCAATTTTTTAACCATTTTGAAAGGGTTGTAGATGAGCAACGCTATAAAGAAATAGAAGCTAGTGATGAAATGAAGAGATGTTTTCCGAAACTAATGGGTAATGTTGTTATGTTGAAACATGCAAGTGTTGCCTATACTCCAAGAGCATTTGAAGTATTTCAGCAAAGATATGAGAAGTCTTTGAATGATCTTGTCAATCTACATAACAAAGATGGATCTTTGTTTGAATATAAAGTGAATACATTTGGCCATGCAAGACAATACAGTGTCACCTTCAATTCTTTTGATGATACAGTTGTCTGCAGTTGTATGAAGTTTGAGCATGTTGGTTTTCTGTGTAGCCACGCACTGAAAGTTCTTGATAATAGAAACATTAAAGTAGTTCCATCTCGATACATCTTGAAGAGATGGACCAAAGATGCAAGATTGGGAAATAGCAGGGAGCTTAAGCAATGTCAGATGCAAGATAACCCTAAGATGGTTGTAGCAAGCTATTACAAAGATTTGTGTCACAGACTTGTCAATTTATCAGCAAGAGCTTCTGAATCCGTGGAGGCTTATCAATTTGCCGCAAAGCAACTTGATGAAGTGATGGAAGGAGTGCAGAAAATCTTGACATTGAAAGGTGATGAAGTTCATGTTATCACCTCAAATAGTATTCATGTAGATGCTTCAGAAAGTGAGCCCGCAGAGATCTTTCCGAATGGACATGCAACTGAGAATCAGGGTGAAAGTAACAGAGTAAGTGGAGAAATTGTCAGGATCGCTACACCAAATAGGTGGCAAACAACGATGAACTATAACAATCAAACTAATTTAGATAGGATTTTAAACGTAGAACCTCCTCCAAATACTGTTCTCTGCATTTCAAGCCCCGCATCTCCATATGTTTCCCCTCAAACCGGGACACCAAATCCCCTTTTGCAGGACTTATTCGGTTTTGAAGCCAATCAAATGGTTCAATGTATGTATGAACAGCCTGATCTTGTGTTGGACCATCAATCTGATACTAACCTGTTTCCACCGCCAAACTTCTTTTCTAACCAACAGAGCTCTCCTTGCGGTACTCAACTAGCGCAGGAGCCTATAATCCCGAACACATACCACGAGTCCATGCCAATCAATAATCAGATGCGACAGGGGATGGATCTTGATATCCAACATCCTCATTCAGAATCCCTTCTCTTGCTATGTGACCATAGATACAGAAGGTCCGATTCTGCGTAA 2667 0.3843 MDGDHSELGNMREENNEVGLETSNNLDLNVEQNCCSPSIVHANGSQSGLTSANAFCSSTILGIGTVFESDEHAYRSYNKYAKLMGFNVRKDWINRSKVHGMVVSRKFTCSKEGYRRTDRRDCNVKKHRKETRTGCLAHMIITRQSDGKYHVTHFEAQHNHDDVNPSNANMLLLDLQNEINVAQAVEVIDSYDSLGPKSRSALKMMNKKLGARDSLDQLSVNYDNYLHSVRGRDMAKGEAGRLLGYFQRQHFENPTFFYALQLDAEDKVSNIFWADDNMVVDYDHFGDVVCLDTTCRTNKALRPFVQFLGVNHHKQVLIFAAAFLYDETVESFNWLLRTFIGTMSGKKPKAIITEQDAAIIEAVNTVLPETKQYTCVWQMYENTVKHLSHFVKDAKSFANDLKCCIYGPKNEEDFTHAWEAMLDKYNLHQNEWLRWMYREREKWAVFFGQNTYFVDIKGFHLGETLSLKFRNHLNPDLDVVQFFNHFERVVDEQRYKEIEASDEMKRCFPKLMGNVVMLKHASVAYTPRAFEVFQQRYEKSLNDLVNLHNKDGSLFEYKVNTFGHARQYSVTFNSFDDTVVCSCMKFEHVGFLCSHALKVLDNRNIKVVPSRYILKRWTKDARLGNSRELKQCQMQDNPKMVVASYYKDLCHRLVNLSARASESVEAYQFAAKQLDEVMEGVQKILTLKGDEVHVITSNSIHVDASESEPAEIFPNGHATENQGESNRVSGEIVRIATPNRWQTTMNYNNQTNLDRILNVEPPPNTVLCISSPASPYVSPQTGTPNPLLQDLFGFEANQMVQCMYEQPDLVLDHQSDTNLFPPPNFFSNQQSSPCGTQLAQEPIIPNTYHESMPINNQMRQGMDLDIQHPHSESLLLLCDHRYRRSDSA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04326 888 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Vivi1g04326 888 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 682 IPR031052 GO:0006355
Vivi1g04326 888 Pfam MULE transposase domain 288 382 IPR018289 -
Vivi1g04326 888 SMART 26again6 579 606 IPR006564 GO:0008270
Vivi1g04326 888 Pfam FAR1 DNA-binding domain 77 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04326 Vivi-Chr1 92216560 92221008 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g04326 MULE 3.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04326 - K17604 gmx:100809803 1304.66