Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04304 ATGGAAGTGAATCATAGCGGCGACGATGGTTTCAGTGAAGAAAAAGATACGCCGGAGACGACGGAGGAACAAACGTTGAACCAGTCGGAGTCGCCGTCGGAGGCGGTGATGAAAGAAGAGGTTTCTGAAACTCGTTCAATGGATGTTATTCCGATGCCGAATCAGATTCCGATGACAATGACAGTTCCGGCGGCGAAGAAGCCGTCGAAGGACCGTCACACGAAGGTGGAGGGACGCGGTCGGAGAATCCGAATGCCGGCCACATGCGCCGCGAGGATATTCCAGCTGACAAGGGAGCTTGGTCATAAATCAGATGGAGAAACAATACGGTGGTTGCTTGAACAATCTGAGCCTGCGATCATTGAAGCAACCGGCACAGGGACCGTCCCGGCAATCGCTGTTTCAGTCGGTGGGACGTTAAAGATTCCGACAACATCACCGGCAAGACCAGACGGTGAAGATGCTCCGAAGAAACGAAGGAGGAGAGCGTCAAATAGTGAGTTTGTTGACTTGAATGAACACGCGTCAATCTGTTCAGGACTCGCACCAATAACTCAAATCGCTTACGGCGGTGGAAGCGGTGGTGATAACGGTGGTAGTGGTGGTCTAGTTCCGTTATGGCCTGTGGTAAGTAATGGTAATGGTGGGACTAATACAACAGGGCCATTTTTTATGTTCCCAAATTCAACTATGAATCAGCCACAGTTTTGGGCTATTCCTGCGGCACCGTTTTTCAATAGACCCGTTTCAGATTTTGTTTCTACTATGCAAATGCAAAATCAAAATCAACTTTCAAATGCTAATGCTAATGGTTCATCTTCATCCACTTTGGCTCCTAGTTTGAGCTCAGCTTCTACATCTACTTGTTCCTCTGCGGTTTCTTCTTCATCTTCTGCGGGACCTACTCAAATGCTTAGGGATTTTTCTTTGGAAGTTTATGACAAGAAAGAGTTGCAATTTATGGGTTGTTCTAGTGCAAATTTAGAGTCACCTCCCACTTCAAATCCTTCAAATTGA 1017 0.472 MEVNHSGDDGFSEEKDTPETTEEQTLNQSESPSEAVMKEEVSETRSMDVIPMPNQIPMTMTVPAAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQSEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPDGEDAPKKRRRRASNSEFVDLNEHASICSGLAPITQIAYGGGSGGDNGGSGGLVPLWPVVSNGNGGTNTTGPFFMFPNSTMNQPQFWAIPAAPFFNRPVSDFVSTMQMQNQNQLSNANANGSSSSTLAPSLSSASTSTCSSAVSSSSSAGPTQMLRDFSLEVYDKKELQFMGCSSANLESPPTSNPSN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04304 338 MobiDBLite consensus disorder prediction 1 21 - -
Vivi1g04304 338 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 314 IPR005333 GO:0003700
Vivi1g04304 338 MobiDBLite consensus disorder prediction 140 166 - -
Vivi1g04304 338 ProSiteProfiles TCP domain profile. 69 123 IPR017887 -
Vivi1g04304 338 MobiDBLite consensus disorder prediction 1 44 - -
Vivi1g04304 338 MobiDBLite consensus disorder prediction 151 166 - -
Vivi1g04304 338 Pfam TCP family transcription factor 69 136 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04304 Vivi-Chr1 91670874 91672493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04304 61 321 TCP Transcription Factor Family AT5G51910 53.818 1.86e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi1g04304 TCP 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04304 - - psat:127091786 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04304 1 91670874 91672493 Vivi1g04304 1 91670874 91672493 ECH