Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04298 ATGGGCAAAGATTGGTATTGGGGTGCCAGAAAATCCTCCAAGAAAACAACACCTCAATCAGATATCCCTTCTGGTTGCATGTGTGCACTTTTTCAAACCTTTGATTTTCATCCCTTTCACTTTTCCATCAACCAACCACAACAACAACAACACTCTCCCATTCACTCCATCTCCAAACAACCTGAAGCTCCTAGGAATAGCTTGGAATCACAAGATGAACAAAGTTTCAAAATCCCCAAAAACATAAGAACAAGAGGAGGAAGTTTCAATGATCTTTCCTCTGACGTTTCGTCTCCCGGAACAAAAACACCAACGTTGGTAGCAAGGTTAATGGGTCTTGATCTTCTTCCAGACGCAAACTCACCCTCTTCATCTTCTTCTTCGTCTCTCTCAACTCCAAGCAGACAAAGCCATTACCATACTAGACCAAAACCAGACAAGATCAAAATAATGAAACACAGACACAGCACAGACAGTGTCATCATGCGGTCTTTGCCTGAAACTCCAAGGTTGTCCTCAGAAAGAACCTCATCATCATTTGTTGAACATAGACTCTCTCTCCAAATCAACAAAGAGAATATGATCAATCACGGTGAAGATTTAGACACTCCTCCTCGGTTTTCATTCTCGAAAATCAGAAAACATGTTAAGGAAAGTGTTGGTGGAAGAAAAGTTGGCAAAGACATCACCAACAACCCAATCAAAAATACTAAACAGCAAGAACAAGAACAAGAAAAAGAAGATTTTGTTGGTCAAATCAAATTCAAGAAGCCTCTCAAACCATTGAAGCCACTAGAAGAATCAAACCAAGGAAAACATTCAAACGCATCTCACTCCCCAAGACTCAGCAGATTCAATGATAACAGCAACATCAACAACCACAAACATTCGCCAACTCTCAAAGACCAAACCACACATCAAGTACCAAAACAATCATCACCACCACCTTTGGTCAACATGGAAGCACAGGTTTCAAGAGTTTCAACAAAGACTAAAACTCAAGCAATGTCAGAGAAGGAGATGATGATCAAGGACAAAAAATCATTCCCAAAATGCAAGAAAACAGCACCACATGGGAATACGAGTCCACGGATCAACAAGAATCAACAGACAACCATCGTAAACAAGCAACAAGAGTCTTTCATTATTCGACCCTCATCATCAACAACTAAAACCAAGAAAACTCATCCACTTTCAAACAACACTCTCCTTCTCAAAACACACCCTTCTCCTACAGATACAAAAATCCCTCAAAAACAGGTAAATGATGATATCCAAGAATCCAAAAACATGTCACAGTTATTTGGTTCTTCGCGCCAGAAGTACACTCTCCGCAACCAAACAACCAACAATGAATCAAATTCTAACAGTTCTATCGCCGCCGGAGCCAAAGACAAAGAACCAGAATATCAGTACATTACAACCATTCTAAACCGTACTGGAATACACCAAGCAACAACAACAAACCTTCAACATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTTCACCGTCTTGAACTCTACCCAAATATTAAAGATAACAAATTTACGCAGAAAAATCATCTGGGTCCCCGCTGTAACCGTAGATTACTATTTGATTTACTCGACGAAGTACTGTCGGAGATTCTCACCAAACCAAACAGTCACCGTGGGTTATTGCTACTAGACACAGTATGGAACCGAGTTCGGAGTTTCCCACGTGCGAAATGCGAGGTTTTGGAAGACATAGACGGGTTAATAGAAATGAAAGACATGATGGATAAGATCAAGGAAGAAGAAGAAGGCGAAAAAGTGGTGGCGGAGATTGAAGGGAAGGTATTAGAAATGTTAGTGAATGAAACAATAACCGTTATGGTGGGTCCTAACCGTTAA 1887 0.4033 MGKDWYWGARKSSKKTTPQSDIPSGCMCALFQTFDFHPFHFSINQPQQQQHSPIHSISKQPEAPRNSLESQDEQSFKIPKNIRTRGGSFNDLSSDVSSPGTKTPTLVARLMGLDLLPDANSPSSSSSSSLSTPSRQSHYHTRPKPDKIKIMKHRHSTDSVIMRSLPETPRLSSERTSSSFVEHRLSLQINKENMINHGEDLDTPPRFSFSKIRKHVKESVGGRKVGKDITNNPIKNTKQQEQEQEKEDFVGQIKFKKPLKPLKPLEESNQGKHSNASHSPRLSRFNDNSNINNHKHSPTLKDQTTHQVPKQSSPPPLVNMEAQVSRVSTKTKTQAMSEKEMMIKDKKSFPKCKKTAPHGNTSPRINKNQQTTIVNKQQESFIIRPSSSTTKTKKTHPLSNNTLLLKTHPSPTDTKIPQKQVNDDIQESKNMSQLFGSSRQKYTLRNQTTNNESNSNSSIAAGAKDKEPEYQYITTILNRTGIHQATTTNLQHFQWFSSTHPLDPSIFHRLELYPNIKDNKFTQKNHLGPRCNRRLLFDLLDEVLSEILTKPNSHRGLLLLDTVWNRVRSFPRAKCEVLEDIDGLIEMKDMMDKIKEEEEGEKVVAEIEGKVLEMLVNETITVMVGPNR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04298 628 MobiDBLite consensus disorder prediction 45 103 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 86 103 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 337 352 - -
Vivi1g04298 628 Pfam DUF761-associated sequence motif 94 121 IPR032795 -
Vivi1g04298 628 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 625 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 359 417 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 218 417 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 1 21 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 45 77 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 118 138 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 117 156 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 268 336 - -
Vivi1g04298 628 MobiDBLite consensus disorder prediction 239 267 - -
Vivi1g04298 628 Pfam Domain of unknown function (DUF4378) 469 618 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04298 Vivi-Chr1 91560675 91563285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04298 76 621 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.731 6.78e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04298 - - psat:127093666 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04298 1 91560675 91563285 Vivi1g04298 1 91560675 91563285 ECH
Vivi2g05584 2 183205978 183209579 Vivi1g04298 1 91560675 91563285 PCT