Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04284 ATGATTAAACCAAGAAACTTTCATCAGCCTCCACAACCAACCATGTCAGGTCAACCTTTCTCACAACCACAAACCAATGATCCCTTTATCCATCTCAAAATCCTCCCAAACCCCGACGGCACAATCACACGCCTACGTGAAGACCAACACACCCCACCTTCACCCAATCCCAACCTTCCAATCCCCGTTCTCACCAAAGACATCCCCATCAACACTTCACACAACACCTCCGCCAGAATATTCCTACCCCGCAAAACACTCAATCCCTCCTCCTCCAGTAAACTCCCTCTTATAGTTTACTTTCACGGTGGCGGTTTCATCTTCTTCAGTGCAGCCTCAGATTTTTTCCACGATCTTTGTTCCAACCTCGCAAACGACGTTAACTCCATCGTTGTATCAATCGACTACCGTCTCGCTCCTGAACACCGTTTACCCGCGGCGTACGATGATGCTATGGATGCGTTACACTGGATCAAAACCCGACCGGACGAATGGTTGAGAAAGTATGCTGATTATTCAAACTGTTACATCATGGGAGGTAGCGCGGGCGCAAATATCGCTTACCACACAGGTCTACGCGTAGCTGTTAATCTCAATAATTCACTTAATATCAGAGGACTGATATTGTCGCAACCGTTTTTCGGTGGGACGAAGAGACTACCTTCGGAGCTGAAGCTGATAAACGATGCCGTTTTGCCGCCGCACGTGTGTGACTTGATGTGGGAACTATCGTTGCCGCTTGGTGTTGACCGTGATCATGAGTATTGTAATCCTACGGTTGGTGATGGTGTTGGGGTTTTGGATAAGGTGAGGGAACTTGGTTGGAGGGTGCTGGTGAGTGGGTGTGAGGGGGATCCATTGATGGATCATCAGAAGGTGTTGGCGAGAGTGATGGAAGAGAAGGGTGTGGTGGTGGTGAGAAGTTTTACGGCAGGGGGGTGTCATGGGGTTGAGGTTCGGGATCTTGTCAAGCAAAAGGAATTGCATAATCTAATCAAAGATTTCATTTCTTTTCACATCTAA 1023 0.48 MIKPRNFHQPPQPTMSGQPFSQPQTNDPFIHLKILPNPDGTITRLREDQHTPPSPNPNLPIPVLTKDIPINTSHNTSARIFLPRKTLNPSSSSKLPLIVYFHGGGFIFFSAASDFFHDLCSNLANDVNSIVVSIDYRLAPEHRLPAAYDDAMDALHWIKTRPDEWLRKYADYSNCYIMGGSAGANIAYHTGLRVAVNLNNSLNIRGLILSQPFFGGTKRLPSELKLINDAVLPPHVCDLMWELSLPLGVDRDHEYCNPTVGDGVGVLDKVRELGWRVLVSGCEGDPLMDHQKVLARVMEEKGVVVVRSFTAGGCHGVEVRDLVKQKELHNLIKDFISFHI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04284 340 Gene3D alpha/beta hydrolase 29 339 IPR029058 -
Vivi1g04284 340 PANTHER ARYLACETAMIDE DEACETYLASE 44 317 - -
Vivi1g04284 340 MobiDBLite consensus disorder prediction 40 62 - -
Vivi1g04284 340 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1g04284 340 SUPERFAMILY alpha/beta-Hydrolases 17 336 IPR029058 -
Vivi1g04284 340 Pfam alpha/beta hydrolase fold 98 317 IPR013094 GO:0016787
Vivi1g04284 340 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04284 Vivi-Chr1 91253017 91254366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04284 15 303 Carbohydrate Esterase AT1G68620 37.419 9.71e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04284 - - gmx:100777786 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04284 1 91253017 91254366 Vivi1g04284 1 91253017 91254366 ECH
Vivi2g05591 2 183350680 183354090 Vivi1g04284 1 91253017 91254366 PCT
Vivi1g04284 1 91253017 91254366 Vivi2g05592 2 183354238 183355479 PCT