Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04283 ATGTCTGTGTCTTTACACATTGCTACTACTACTATACTCTCCTTGCATCTCCTTCTCTTCCTTGTCAATGCTAACTCATCCATGGATCCATACAAAGTACTCAACCTAATCCTCAACCCAAACGGCACCGTCACACGCTTACAAAAAATCCCACAATCCCCTCCTTCACCAAATCCAAATCTCCCCACAACCGCACTCTCCAAAGATATCACCATCAACCAATCAAAACATACTTGGGCTCGAATCTACCTTCCCCACAAACCACTTTCCAAGAAGCTACCTCTCATCATCTTCTACCATGGCGGCGGCTTCATTTTCTACAGCGCCGCTTCAACTTACGTCCACAACTTCTGCGAAAACATCGCCAACAAAACTCAATCCGTCGTCGTTTCACTCGACTACCGCCTCGCACCAGAACACCGTCTTCCCGCGGCGTATGAAGATTCCGTGGAAATTCTTCACTGGATTAGAACTTCAAACGACGCATGGTTGACACGTTACGCTGATTACTCACGTTGTTATCTCATGGGAGAGAGTGCTGGAGGAAATATCGCCTACATCGCGGGTCTACGTGCGGCTGCGATAGTTGACGAGATTAAACCGATTAGCATCAGAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACCAAGAGGACTCCATCGGAGTTAAGGCTTGAGAAGGATATGAATCTACCTTTGATTTTTACCGATGCGTTGTGGGAATTGTCGTTACCCGTAGGCGTTGATCGTGATTACGTGTATTCTAATCCAACGGTGAATGGTGGTGATAAGATTTTGGAGAAGATTAAGTTGTTTGGGTGGAAGGTTGCGGTTTTTGGGTGTGATGGGGATCAACTTGTGGACCGTCAGAGGGAATTAGTGAAGCTGCTTGAGGGTAAAAATGTCCATGTGGTTGGGAAATTTTATAGTGGGGGTAGACATGGTATTTTTATGGGTGATCCTTCCATGTCTGAAAAAGTGTTCGATTTGGTCAAGAGTTTTCAATAA 1011 0.454 MSVSLHIATTTILSLHLLLFLVNANSSMDPYKVLNLILNPNGTVTRLQKIPQSPPSPNPNLPTTALSKDITINQSKHTWARIYLPHKPLSKKLPLIIFYHGGGFIFYSAASTYVHNFCENIANKTQSVVVSLDYRLAPEHRLPAAYEDSVEILHWIRTSNDAWLTRYADYSRCYLMGESAGGNIAYIAGLRAAAIVDEIKPISIRGLILIQPFFGGTKRTPSELRLEKDMNLPLIFTDALWELSLPVGVDRDYVYSNPTVNGGDKILEKIKLFGWKVAVFGCDGDQLVDRQRELVKLLEGKNVHVVGKFYSGGRHGIFMGDPSMSEKVFDLVKSFQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04283 336 Gene3D alpha/beta hydrolase 31 336 IPR029058 -
Vivi1g04283 336 PANTHER ARYLACETAMIDE DEACETYLASE 41 309 - -
Vivi1g04283 336 SUPERFAMILY alpha/beta-Hydrolases 37 330 IPR029058 -
Vivi1g04283 336 Pfam alpha/beta hydrolase fold 96 318 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04283 Vivi-Chr1 91243147 91244549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04283 41 332 Carbohydrate Esterase AT5G16080 34.967 1.88e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04283 - - gmx:100777262 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05592 2 183354238 183355479 Vivi1g04283 1 91243147 91244549 PCT
Vivi1g04283 1 91243147 91244549 Vivi2g05593 2 183361061 183362348 PCT