Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04269 ATGACTGACCTTACAATTAGGAGAAAAACTTACAGCTTGCTTAGCTTCACTAGAAGTGCAGTCTACACTTCAGATCCTGCTAATGTTGAGCATATGCTGGTTACAAACTTTTCAAACTACGGCAAGGGTCGGTATCACCATGATGTCCTGACAGATCTACTGGGAGATGGTATATTCACGGTGGATGGAGAGAAGTGGCAACATCAACGGAAATCAGCAAGCTATCAATTCTCGACTAAGTTATTGAGAGAATTCAGCGGCTCAGTGTTCAAATCCAATGCTGTCAAACTTGCAAGGATAGTGTCCGAAGCAGCAATCTCAAACAATATCATTGAGCTGCAGGACTTGCTCATGAAGTCAACTCTAGATTCTGTATTCAAAGTTATCCTTGGTGTAGAACTGGACACAATGTGTGGAACATATAGAGAAGGAACACAATTTTCCAAAGCTTTTGATGAAGCAAGTGCTGCTATCATGTTTCGGTATGTTAACTTTCTCTGGAAGGTTCAGCGGTGCTTGAACATCGGTTCGGAAGCAGTACTAAAGAAAAGCCTAAAAGTGATCGACGAATACGTGTATAAATTAATCAGAAGCAAGATTGAGCAATCTCAAAATCCACAAGATAACTCTCTTGGATTGAAAGGAGACATTTTGTCAAGGTTTCTCGAATTAAATGAGACAGATCCAAAGTACCTTAAAGACATTATTTTGAGTTTTATCATTGCAGGAAAAGATACAACAGCAATCACTCTTTCCTGGTTTCTTTACCAACTGTGCAAGAATCCTCATGTGCAGGAAAAGATTGCACAAGAGATTAGGGAGGCAACAAAAGTAGAAAATGGATCAACTATTGACAATCTTGCGGCTCAAGTAACCGATGAAAGCATGGAAAAGATGAAGTATCTGCATGCAGCATTGACCGAGACACTCAGGCTGCATCCACCAGTTCCATTGGAAAGCAAGTATTGTTTTTTGGATGACAAATGGCCGGATGGATATAATGTGAGGAAAGGTGATCTTGTTTCATTCCAACCATATGTGATGGGAAGGATGAAATTCTTATGGGGTGAAGATGCTGAGATTTTTAGGCCAGAGAGATGGTTTGATGAAAATGGAAATTTAAAGAGAGAAAGCTCTTTTAAATTTACAGCTTTCCAGGCGGGTCCAAGAATTTGCCTTGGCAAAGAGTTTGCATACAGACAGATGAAGATATTTTGTGCAATTCTGTTAGGTAGCCACAGCTTCAAACTAGCATACCAAAACAAATTGGTAAAATATAGAACAATGCTCACTCTGCAAATTGATGGTGGCCTGCATGTATATGCTTTTAAGAGAAATTAA 1341 0.3952 MTDLTIRRKTYSLLSFTRSAVYTSDPANVEHMLVTNFSNYGKGRYHHDVLTDLLGDGIFTVDGEKWQHQRKSASYQFSTKLLREFSGSVFKSNAVKLARIVSEAAISNNIIELQDLLMKSTLDSVFKVILGVELDTMCGTYREGTQFSKAFDEASAAIMFRYVNFLWKVQRCLNIGSEAVLKKSLKVIDEYVYKLIRSKIEQSQNPQDNSLGLKGDILSRFLELNETDPKYLKDIILSFIIAGKDTTAITLSWFLYQLCKNPHVQEKIAQEIREATKVENGSTIDNLAAQVTDESMEKMKYLHAALTETLRLHPPVPLESKYCFLDDKWPDGYNVRKGDLVSFQPYVMGRMKFLWGEDAEIFRPERWFDENGNLKRESSFKFTAFQAGPRICLGKEFAYRQMKIFCAILLGSHSFKLAYQNKLVKYRTMLTLQIDGGLHVYAFKRN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04269 446 Pfam Cytochrome P450 10 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS E-class P450 group IV signature 233 259 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS E-class P450 group IV signature 333 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS E-class P450 group IV signature 299 315 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 SUPERFAMILY Cytochrome P450 10 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 CDD CYP86A 16 438 - -
Vivi1g04269 446 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 Gene3D Cytochrome P450 7 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04269 446 PANTHER CYTOCHROME P450 2 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04269 Vivi-Chr1 90973374 90976814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04269 2 446 Cytochrome P450 AT2G45510 51.663 1.20e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04269 - - pvu:PHAVU_007G063800g 673.7