Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04268 ATGTATTTGAGGATCATTTTGGATACAATTAAATGGCATGATCTTGGTTCCTCCATGAATATTCTTACCAAGCTCACACCACAACAAATATCAGTTACTTATATCATCAAAATTCATGGAAGTAGATTTTTGGACAAGAAAAGAAGATATCACCCAGTTGCTGGCACAGTGATACATCTACTCTTCAACTTCCATAGGCTGCTTGAGTACATGACTGACCTTACAATTAGGAGAAAAACTTACAGCTTGCTTAGCTTCACTAGAAGTGCAGTCTACACTTCAGATCCTGCTAATGTTGAGCATATGCTGGTTACAAACTTTTCAAACTACGGCAAGGGTCGGTATCACCATGATGTCCTGACAGATCTACTGGGAGATGGTATATTCACGGTGGATGGAGAGAAGTGGCAACATCAACGGAAATCAGCAAGCTATCAATTCTCGACTAAGTTATTGAGAGAATTCAGCGGCTCAGTGTTCAAATCCAATGCTGTCAAACTTGCAAGGATAGTGTCCGAAGCAGCAATCTCAAACAATATCATTGAGCTGCAGGACTTGCTCATGAAGTCAACTCTAGATTCTGTATTCAAAGTTATCCTTGGTGTAGAACTGGACACAATGTGTGGAACATATAGAGAAGGAACACAATTTTCCAAAGCTTTTGATGAAGCAAGTGCTGCTATCATGTTTCGGTATGTTAACTTTCTCTGGAAGGTTCAGCGGTGCTTGAACATCGGTTCGGAAGCAGTACTAAAGAAAAGCCTAAAAGTGATCGACGAATACGTGTATAAATTAATCAGAAGCAAGATTGAGCAATCTCAAAATCCACAAGATAACTCTCTTGGATTGAAAGGAGACATTTTGTCAAGGTTTCTCGAATTAAATGAGACAGATCCAAAGTACCTTAAAGACATTATTTTGAGTTTTATCATTGCAGGAAAAGATACAACAGCAATCACTCTTTCCTGGTTTCTTTACCAACTGTGCAAGAATCCTCATGTGCAGGAAAAGATTGCACAAGAGATTAGGGAGGCAACAAAAGTAGAAAATGGATCAACTATTGACAATCTTGCGGCTCAAGTAACCGATGAAAGCATGGAAAAGATGAAGTATCTGCATGCAGCATTGACCGAGACACTCAGGCTGCATCCACCAGTTCCATTGGAAAGCAAGTATTGTTTTTTGGATGACAAATGGCCGGATGGATATAATGTGAGGAAAGGTGATCTTGTTTCATTCCAACCATATGTGATGGGAAGGATGAAATTCTTATGGGGTGAAGATGCTGAGATTTTTAGGCCAGAGAGATGGTTTGATGAAAATGGAAATTTAAAGAGAGAAAGCTCTTTTAAATTTACAGCTTTCCAGGCGGGTCCAAGAATTTGCCTTGGCAAAGAGTTTGCATACAGACAGATGAAGATATTTTGTGCAATTCTGTTAGGTAGCCACAGCTTCAAACTAGCATACCAAAACAAATTGGTAAAATATAGAACAATGCTCACTCTGCAAATTGATGGTGGCCTGCATGTATATGCTTTTAAGAGAAATTAA 1551 0.3907 MYLRIILDTIKWHDLGSSMNILTKLTPQQISVTYIIKIHGSRFLDKKRRYHPVAGTVIHLLFNFHRLLEYMTDLTIRRKTYSLLSFTRSAVYTSDPANVEHMLVTNFSNYGKGRYHHDVLTDLLGDGIFTVDGEKWQHQRKSASYQFSTKLLREFSGSVFKSNAVKLARIVSEAAISNNIIELQDLLMKSTLDSVFKVILGVELDTMCGTYREGTQFSKAFDEASAAIMFRYVNFLWKVQRCLNIGSEAVLKKSLKVIDEYVYKLIRSKIEQSQNPQDNSLGLKGDILSRFLELNETDPKYLKDIILSFIIAGKDTTAITLSWFLYQLCKNPHVQEKIAQEIREATKVENGSTIDNLAAQVTDESMEKMKYLHAALTETLRLHPPVPLESKYCFLDDKWPDGYNVRKGDLVSFQPYVMGRMKFLWGEDAEIFRPERWFDENGNLKRESSFKFTAFQAGPRICLGKEFAYRQMKIFCAILLGSHSFKLAYQNKLVKYRTMLTLQIDGGLHVYAFKRN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04268 516 Pfam Cytochrome P450 52 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PANTHER CYTOCHROME P450 38 510 - -
Vivi1g04268 516 CDD CYP86A 86 508 - -
Vivi1g04268 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 Gene3D Cytochrome P450 50 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS E-class P450 group IV signature 462 480 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS E-class P450 group IV signature 369 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS E-class P450 group IV signature 403 417 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 PRINTS E-class P450 group IV signature 303 329 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04268 516 SUPERFAMILY Cytochrome P450 50 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04268 Vivi-Chr1 90973374 90976814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04268 48 516 Cytochrome P450 AT2G45510 51.368 2.08e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04268 - - pvu:PHAVU_007G063800g 734.176