Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04255 ATGATAATTTTTGGAGCAGATGTTACGCACCCTGAAAACGGAGAAGACACTAGCCCCTCAATAGCAGCTGTTGTAACATCCCCAGATTGGCCTGAAGTGACAAAATATGCTGGCTTAGTGTGTGCTCAAGCTCACAGACAGGAACTTATACAAGATTTATATAAAACATGGCATGATCCTGTTCGCGGCACTGTTAGTGGCGGCATGATAAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTTTACTTTACGAGTTGGATGCAATCCGGAAGGCATGTGCTTCCTTAGAACCAAACTATCAGCCTCCAGTAACTTTCATCATTGTACAAAAACGACACCATACTCGGTTATTTCCAAACAACCATAGGGACAGGAATAACACAGATAAGAGTAGAAATATATTGCCTGGTAAGCTCCGCATTCCTAAAATGCATTTGTGCATAAGTTAG 453 0.4172 MIIFGADVTHPENGEDTSPSIAAVVTSPDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFPNNHRDRNNTDKSRNILPGKLRIPKMHLCIS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04255 150 SUPERFAMILY Ribonuclease H-like 2 138 IPR012337 -
Vivi1g04255 150 Pfam Piwi domain 2 138 IPR003165 GO:0003676
Vivi1g04255 150 ProSiteProfiles Piwi domain profile. 1 138 IPR003165 GO:0003676
Vivi1g04255 150 Gene3D - 1 140 IPR036397 GO:0003676
Vivi1g04255 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04255 Vivi-Chr1 90649552 90650387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04255 2 140 Eukaryotic Initiation Factors Gene Family AT5G43810 78.750 6.21e-83 260