Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04216 ATGAACGCCGGCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTCAACCAGCTCACCGAAGATGACATTTCTCAACTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCACTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCCGCGCCTGTTTCCTCCGCCATACACCGCCATCATCACCACCACGTTCAACCTCCTCAAGGGAATTTGAGTGAAGCTACGGTGAAGGGTTCGGATCCCGATGAGATCGGTGTTTGGGCTGTGGAAGATGTTCAGATGTCCATTTCACCTGTTGCAGATAAACCTAATGAAACAAATGATGCTCCTGCCGGAGGGTGCGCGCCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTGGCTGCAAGTCCGTCCACGTTTCCCCAGGACAATCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCTTGCAGCATACCAATTGATAAGGACGCCCTCTTCCCCACTAACACAACAATCCTTCAAGTTTCTCAAACAGATAAGATGGTCGAATATCCTCTACAATACAGGGAGAAAGGGAGCACGCCTCGAGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCGCTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGACCAAAGGGAAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAAGTCCACGCCTCAAATGGGAACTCAAGTCGTAGTAGCACTGACTCTCCACCACAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTCGCCCTTCCTATTGATCTGAATGATAAAGTGTTACTCGAAGAAAGATGA 999 0.4845 MNAGGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHVQPPQGNLSEATVKGSDPDEIGVWAVEDVQMSISPVADKPNETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSTFPQDNPLNKNAAVWASCSIPIDKDALFPTNTTILQVSQTDKMVEYPLQYREKGSTPRDADVEGQASRKVSLQRYLEKRKDRGRPKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKVLLEER 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04216 332 Pfam tify domain 144 172 IPR010399 -
Vivi1g04216 332 Pfam Jas motif 240 257 IPR018467 -
Vivi1g04216 332 MobiDBLite consensus disorder prediction 226 240 - -
Vivi1g04216 332 MobiDBLite consensus disorder prediction 284 314 - -
Vivi1g04216 332 MobiDBLite consensus disorder prediction 65 101 - -
Vivi1g04216 332 MobiDBLite consensus disorder prediction 226 246 - -
Vivi1g04216 332 SMART tify_2 138 173 IPR010399 -
Vivi1g04216 332 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 274 IPR040390 -
Vivi1g04216 332 MobiDBLite consensus disorder prediction 284 318 - -
Vivi1g04216 332 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04216 Vivi-Chr1 90069778 90077464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04216 5 307 Tify Gene Family AT4G14720 43.865 4.05e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi1g04216 tify 6.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04216 - - vvo:131643492 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04216 1 90069778 90077464 Vivi1g04216 1 90069778 90077464 ECH