Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04215 ATGAACGCCGGCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTCAACCAGCTCACCGAAGATGACATTTCTCAACTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCACTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCCGCGCCTGTTTCCTCCGCCATACACCGCCATCATCACCACCACGTTCAACCTCCTCAAGGGAATTTGAGTGAAGCTACGGTGAAGGGTTCGGATCCCGATGAGATCGGTGTTTGGGCTGTGGAAGATGTTCAGATGTCCATTTCACCTGTTGCAGATAAACCTAATGAAACAAATGATGCTCCTGCCGGAGGGTGCGCGCCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTGGCTGCAAGTCCGTCCACGTTTCCCCAGGACAATCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCTTGCAGCATACCAATTGATAAGGACGCCCTCTTCCCCACTAACACAACAATCCTTCAAGTTTCTCAAACAGATAAGATGGTCGAATATCCTCTACAATACAGGGAGAAAGGGAGCACGCCTCGAGATGCTGAGGGTCAGGCAAGCAGAAAAGTGTCGCTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGACCAAAGGGAAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAAGTCCACGCCTCAAATGGGAACTCAAGTCGTAGTAGCACTGACTCTCCACCACAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTCGCCCTTCCTATTGATCTGAATGATAAAGTGTTACTCGAAGAAAGATGA 993 0.4854 MNAGGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHVQPPQGNLSEATVKGSDPDEIGVWAVEDVQMSISPVADKPNETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSTFPQDNPLNKNAAVWASCSIPIDKDALFPTNTTILQVSQTDKMVEYPLQYREKGSTPRDAEGQASRKVSLQRYLEKRKDRGRPKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKVLLEER 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04215 330 Pfam tify domain 144 172 IPR010399 -
Vivi1g04215 330 MobiDBLite consensus disorder prediction 282 312 - -
Vivi1g04215 330 MobiDBLite consensus disorder prediction 65 101 - -
Vivi1g04215 330 Pfam Jas motif 238 255 IPR018467 -
Vivi1g04215 330 SMART tify_2 138 173 IPR010399 -
Vivi1g04215 330 MobiDBLite consensus disorder prediction 282 316 - -
Vivi1g04215 330 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Vivi1g04215 330 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 272 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04215 Vivi-Chr1 90069778 90077465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04215 5 305 Tify Gene Family AT4G14720 43.252 1.33e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi1g04215 tify 6.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04215 - - vvo:131643492 629.402