Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04208 ATGTGTATAGCAAATTCAAACTTTGGGGAACCCTTCTTCTTGGTCATACACGAAAGAGAGAAAATGAAACGTGAACACTTGAATGAACTTTTCCTTGATCTTGCCAATGCTCTTGATCTCAATGATCCGAACAATGGAAAGCCTTCTATATTGTGTGAAGCTTCTAAGCTTCTAAAGGACTTGCTCTGTCACATTCAGTCCCTCAAGAAGGAAAACGTCTCTTTGTTGTCTGAATCTCAATATGCAGGTGACTGTGGAAAAAATGAGCTCAAGAAAGAGAATATTAGCCTAGAAACTCAAATTGAGAAGCTTCAAGGAGAGATACGGGCAAGGATAGCTCATTCAAAACATGACCTGAATGCACCTCCTCAACTGGAGCTTGAGCTGCCAAAGCAGACAAAATTTGCAAGATATGGTCTCCAAATGCCTACCGTAGAACCTTCATTGCAGCAAGGACCTACTGTTTTGGTTGTTCCTTTTCGTCCAGATCTTCAAGCTACTTTTCCAGCTCCTAACGTTACTGATCTCATGTCTAACCCTACACCTGTTATCAGTAAACCACATGCCAGATATCCCACACCAGCAGATTCATGGCCATTGCAACTGCTTGGAGAGCAACCAACAGAGTAA 630 0.4206 MCIANSNFGEPFFLVIHEREKMKREHLNELFLDLANALDLNDPNNGKPSILCEASKLLKDLLCHIQSLKKENVSLLSESQYAGDCGKNELKKENISLETQIEKLQGEIRARIAHSKHDLNAPPQLELELPKQTKFARYGLQMPTVEPSLQQGPTVLVVPFRPDLQATFPAPNVTDLMSNPTPVISKPHARYPTPADSWPLQLLGEQPTE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04208 209 Coils Coil 87 107 - -
Vivi1g04208 209 PANTHER TRANSCRIPTION FACTOR BHLH47 18 208 - -
Vivi1g04208 209 MobiDBLite consensus disorder prediction 190 209 - -
Vivi1g04208 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 75 IPR036638 GO:0046983
Vivi1g04208 209 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04208 Vivi-Chr1 89663999 89665062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04208 19 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 43.750 1.46e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04208 - - psat:127073805 307.76