Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04206 ATGGGAAAAAAAGGTAAATGGCTTAAGAATTTCTTGACAGGGAAAAGAGAGAAAGATAAAGATAAAGAGAAATCTACAATAAACCAGAATTTTTCTAATGGAACAGAAAATCCAACTACTCCGATTTCGAGTTCAAATTCAAGTTCTACGAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCGTCTGCATCGGCTACGCCAACGGTTTCTAAGGAGTTGAGTAAATCTGAAGTTATTGCTTCAGTGACAGTGCCAACTGTTACGGTTACTGATATTCAGAATGAGCAGAGAAATCATGCTATGGCTGTGGCTGTTGCAACAGCGGCCGCAGCTGATGCTGCAGTGGCTGCTGCACAGGCTGCAGCTGTTGTGATCCGCTTGACTTCTGGTTCGAATGAGAATTCTAGAAGTATTGAAGAGGCTGCTGCTGTTAAAATTCAATGCGTCTATCGATCTCACTTGGCGAGAAAGGCGTTGCGTGCTTTGAGAGGATTAGTGAAGTTGCAGGCACTGATAAGGGGTCACTTGGTGAGAAAACAGGCTAAGGCAACACTTAGATGTATGCAGGCTTTGGTGACAGCACAAGCTAGAGCTCGTGCTCAACGGATCCGAATGGTGTCCGAAGGAAAGCCTAATCCAAACCAATCAACTCCTAGAAATGTCATGGAAAATGACTTGTTCAGGCAAATATACAATGAAATGGACAGAGGCTTAGAAGACAACATCAAGATTGTTGAAATGGACTTTTGTGAATCAAAAGGTAACTCTACAAGCAGAAGCAGCAGTGTAAATCATCATGGACAATATTATGAACAATCTGAACATAGATATTCCACAAATGGTTCCTATTCTTACTCAAAAGAAGAAAACTACAAAGTATCACCAGCTCCATCAGCTTTAACAGAAATGAGTCCAAAAGCATGCAGTGGCCATTTCGAAGATTGCTTCAGCACAGCACAAAGCAGCCCTCATTACTATTCTGCTATATCGAAAACAGACGATTCAGCTTCAAACCATCCTTTTTCATTCCCTAGACCATCTTATGCAGAATCTATGTCCTATGATTACCCTTTGTATCCAAGTTACATGGCTAATACAGAATCATCCAAGGCTAAAGCTAGATCACACAGTGCACCAAAACAAAGGCCAGATTCATTTGAGAGGCAACCGAGCCGACGAAGAATTTCGGTTGAGGGAAGAAATGTACCTAGGCCACTGAGGATGCAGAGGTCATCTTCACATGTTGGTGCCACTGCTCAGAATTACCAATATCCATTGTCAATTAAGCTTGATAGATCGGCGGTCTCGCTCCATGACAGCGAGTGTGGCTCGACAAGTACAATGCTTACGAATACTAATTACTGCAGATCTCTTGTTGCATATGATCCAGATGGAGATAGGAACTGA 1407 0.4215 MGKKGKWLKNFLTGKREKDKDKEKSTINQNFSNGTENPTTPISSSNSSSTKEKKRWSFRRSSASATPTVSKELSKSEVIASVTVPTVTVTDIQNEQRNHAMAVAVATAAAADAAVAAAQAAAVVIRLTSGSNENSRSIEEAAAVKIQCVYRSHLARKALRALRGLVKLQALIRGHLVRKQAKATLRCMQALVTAQARARAQRIRMVSEGKPNPNQSTPRNVMENDLFRQIYNEMDRGLEDNIKIVEMDFCESKGNSTSRSSSVNHHGQYYEQSEHRYSTNGSYSYSKEENYKVSPAPSALTEMSPKACSGHFEDCFSTAQSSPHYYSAISKTDDSASNHPFSFPRPSYAESMSYDYPLYPSYMANTESSKAKARSHSAPKQRPDSFERQPSRRRISVEGRNVPRPLRMQRSSSHVGATAQNYQYPLSIKLDRSAVSLHDSECGSTSTMLTNTNYCRSLVAYDPDGDRN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04206 468 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Vivi1g04206 468 MobiDBLite consensus disorder prediction 367 418 - -
Vivi1g04206 468 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Vivi1g04206 468 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Vivi1g04206 468 MobiDBLite consensus disorder prediction 254 283 - -
Vivi1g04206 468 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Vivi1g04206 468 MobiDBLite consensus disorder prediction 27 51 - -
Vivi1g04206 468 MobiDBLite consensus disorder prediction 373 400 - -
Vivi1g04206 468 MobiDBLite consensus disorder prediction 10 26 - -
Vivi1g04206 468 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Vivi1g04206 468 MobiDBLite consensus disorder prediction 1 70 - -
Vivi1g04206 468 Pfam Protein of unknown function (DUF4005) 323 399 IPR025064 -
Vivi1g04206 468 Gene3D - 139 190 - -
Vivi1g04206 468 SMART iq_5 138 160 IPR000048 GO:0005515
Vivi1g04206 468 SMART iq_5 161 182 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04206 Vivi-Chr1 89524491 89526866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04206 1 458 IQD Protein Family AT4G14750 43.243 1.22e-99 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04206 - - gmx:100817667 609.372