Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04177 ATGGAGTTTGGTAACGACGAGGCTTCTGATCTTCCACCGGTGGCACCCGAAGAATCCGGCGACGGTTTACCTTATGCACCAGAAAATTTTCCGAATCCCGGCGACATTTGGCGGTGGAAAGCTGGCCTGAGGATTTCGTCCAACGGTAACTTTAGGGACCGGTATCTGTATCTTCCTCGGCGTATTGCTGCCTCTCACCGCGGTGGATTCAAAAGCAAGCTTGCGGTTGAACGCTACGTCAAAGAATTCTTCCCTGACGCTAGTCTTGTTGATTTCTTTGCTTCTTTCAGCTGGAGCATTCCCTCTGGTCTTCCTGGCAATATGAATCCTGTTGCTGCAGCTGATGGACTTCTTCGTCAGTTAGAATTAAAACAGCAGCCTGAATCTGATTCCGACGTTGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTGATTTTGGAAAAAGAAAAAGAAAACTCACCATTTGCTCCGTGTGATATCTGCTGCGTTGAATCGAAATTTTGCCGTGAATGTTGCTGCATTCTCTGTTACAAATCAGTTGATTCAGCTTATGGCGGCTATAGCTATATCATGTGCAAAAAAGAACTAGGCGATAATATTTGCGGCCATGTTTGTCATCTAGAATGCGCTCTTCGATCTTATTCGGCTGGTACTGTTGGAGGAACGATTGGATTGGACGCTGAGTATTTCTGTTGGCGCTGTGATGGGAGGACTGAACTGATTGCTCATGCAAATAAGCTTCTACAAACTTGTGAAGCTATTGATGCTGATGGTGATGCTATGAAAGAAAAGATTCTAGGGCTTGGCATTTGTCTCTTGCGCGGTTCAGAGAAACCCGCTGCAAAGGAGCTTATGAGCCTTATTACACTGGCCATGTCAAAGCTTAAACATGATGGGACCAATACTGAAGATATCCTGAATGTTGATGTCAAAATTACTGCTAATTCTTCAGGTTCTTCCGGTAACGGCAATGCTGCGATGGATACTTCAGACGACGAAGATCCTTTAAAGAATTTAAATGTTCAAAAAGGAACAAAATCTTTTAATTATCAATCTGAATTATTAAAACTTGATGCTGAGTTTGATAAGGCTATGGAGGATCTGGAAAAATCTCAAAAGTATGAATATAAGCTGGCAGAGGAAAGCCTTCATACACAAAAGGATTATTTACTAAATATTACTCAAAAACTCGATGAACAGAAGTCTGAGTTAGCAGCTGGTCCATCTCATTCAAGTGCCTTGCTTCAAATTGTTGAGGAAAGAAATGAACAATTAAGGCAGGAACTGAAGAAATTTGATGAAATGAAGAAGGTAGCTAATGGTTTTGGCAGCACATCCAAAGAAATTTTAGAAAAGCATTTTGGCTTGTAA 1377 0.4212 MEFGNDEASDLPPVAPEESGDGLPYAPENFPNPGDIWRWKAGLRISSNGNFRDRYLYLPRRIAASHRGGFKSKLAVERYVKEFFPDASLVDFFASFSWSIPSGLPGNMNPVAAADGLLRQLELKQQPESDSDVGGCKAGNKTCSSLILEKEKENSPFAPCDICCVESKFCRECCCILCYKSVDSAYGGYSYIMCKKELGDNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELIAHANKLLQTCEAIDADGDAMKEKILGLGICLLRGSEKPAAKELMSLITLAMSKLKHDGTNTEDILNVDVKITANSSGSSGNGNAAMDTSDDEDPLKNLNVQKGTKSFNYQSELLKLDAEFDKAMEDLEKSQKYEYKLAEESLHTQKDYLLNITQKLDEQKSELAAGPSHSSALLQIVEERNEQLRQELKKFDEMKKVANGFGSTSKEILEKHFGL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04177 458 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 6 458 - -
Vivi1g04177 458 MobiDBLite consensus disorder prediction 319 339 - -
Vivi1g04177 458 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1g04177 458 Pfam PHD - plant homeodomain finger protein 139 264 IPR032881 -
Vivi1g04177 458 Coils Coil 417 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04177 Vivi-Chr1 88609800 88612185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04177 166 298 PHD Gene Family AT3G24440 28.986 1.25e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04177 - - psat:127092568 758.059