Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04176 ATGGAGTCCGGTGATGACGGGGCTTCTGATCTTCCACCGGTGGCACCCGAAGGAACCGGCGAAGGTTTACCTTATGCACCAGAAAATTTTCCGAATTCCGGCGACATTTGGCGGTGGAAAGCTGGCCTGAGGATTTCGTCCAACGGTAACTTTAGGGACCGGTATCTGTATCTTCCTCGGCGTCTTGCTGCCTCTCACCGCGGTGGATTCAAAAGCAAGCTTGCGGTTGAACGCTACGTCAAAGAATTCTTCCCTGACGCTAGTCTTGTTGATTTCTTTGCTTCTTTCAGCTGGAGCATTCCCTCTGGTCTTCCTGGCAATATGAATCCTGTTGCTGCAGCTGATGGACTTCTTCGTCAGTTAGAATTAAAACAGCAGCCTGAATCTGATTCCGACGTTGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTGATTTTGGAAAAAGAAAAAGAAAACTCACCATTTGCTCCATGTGACATCTGCTGCGTTGAATCGAAATTTTGCCGTGAATGTTGCTGCATTCTCTGTTACAAATCAGTTGATTCAGCTTATGGCGGCTATAGCTATATCATGTGCAAAAAAGAGCTAGGCGATAATATTTGCGGCCATGTTTGTCATCTGGAATGCGCTCTTCGATCTTATTCGGCTGGTACTGTTGGAGGAACGATTGGATTGGACGCTGAGTATTTCTGTTGGCGCTGTGATGGGAGGACTGAACTGATTGCTCATGCAAATAAGCTTCTACAAACTTGTGAAGCTATTGATGCTGATGGTGATGCTATGAAAGAAAAAATTCTAGGGCTTGGCATTTGTCTCTTGCGCGGTTCAGAGAAACCCGCTGCAAAGGAGCTTATGAGCCTTATTACACTGGCCATGTCAAAGCTTAAATATGATGGGACCAATACTGAAGATGTCCTGAATGTTGATGCCAAAATTACTGCTAATTCTTCAGGTTCTTCCGGTAACGGCAATGCTGCGATGGATACTTCAGACGACGAAGATCCTTTAAAGAATTTGAATGTTCAAAAAGGAACAAAATCTTTTAATTATCAATCGGAATTATTAAAACTTGATGCTGAGTTTGATAAGGCTATGGAGGATCTGGAAAAATCTCAAAAGTGTGAATATAAGCTGGCAGAGGAAAGCCTTCATACACAAAAGGATTATTTACTAAATATTTCTCAGCAACTCGATGAACAGAAGTCTGAGTTAGCAGCAGGTCCATCTCATTCAAGTACCTTGCTTCAAATTGTTGAGGAAAGAAATGAACAATTAAGGCAGGAACTGAAGAAATTTGATGAAATGAAGAAGGTGGCTAATGGTTTTGGCAGCACATCCAAAGAAATTTTAGAAAAGCATTTTGGCTTGTAA 1377 0.4285 MESGDDGASDLPPVAPEGTGEGLPYAPENFPNSGDIWRWKAGLRISSNGNFRDRYLYLPRRLAASHRGGFKSKLAVERYVKEFFPDASLVDFFASFSWSIPSGLPGNMNPVAAADGLLRQLELKQQPESDSDVGGCKAGNKTCSSLILEKEKENSPFAPCDICCVESKFCRECCCILCYKSVDSAYGGYSYIMCKKELGDNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELIAHANKLLQTCEAIDADGDAMKEKILGLGICLLRGSEKPAAKELMSLITLAMSKLKYDGTNTEDVLNVDAKITANSSGSSGNGNAAMDTSDDEDPLKNLNVQKGTKSFNYQSELLKLDAEFDKAMEDLEKSQKCEYKLAEESLHTQKDYLLNISQQLDEQKSELAAGPSHSSTLLQIVEERNEQLRQELKKFDEMKKVANGFGSTSKEILEKHFGL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04176 458 MobiDBLite consensus disorder prediction 318 337 - -
Vivi1g04176 458 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 10 458 - -
Vivi1g04176 458 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1g04176 458 Pfam PHD - plant homeodomain finger protein 139 264 IPR032881 -
Vivi1g04176 458 Coils Coil 417 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04176 Vivi-Chr1 88576540 88578663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04176 166 298 PHD Gene Family AT3G24440 28.986 1.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04176 - - psat:127092568 751.125