Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04174 ATGTTTTTTTCTCTCTCTCACTCACTCACTCATTGTGCAAAAATGCCAAGTCTATTCTCAAAACAACTTCACCTCTGTTTCTTCAAGCTCAAATACCCTACAATTCTCTCCCAACCTCACTCACAACAAAGCACTACTCCATCACCATCACCATCACCACCTTACACCTTCCATTTCAACACAACCTTCACCCACCACCACCACCACCACGAAGAAGACTATTTCTCCGACGACACCACGGAGCTTCCACCACCCGACTTCGCCTCCGTCTTCGCATCCCAACGGTTCTTCTTCTCCTCCCCCGGCAGCTCCAACTCCATCACAGAATCAGAGTCTCCCCCCAACGACACTCCACCCTACAACTCGTTGATACCAAAAGGAGGTAGCGTGAAAAGGGTGCCAAAATACTCTGTAAACCCTTACGTTGATTTCCTCCGTTCTATGCAGGAAATGATTCAATCTCAAGAACAAGTGTTCGATGTTACTAACGATTGGGATTATCTTCATGAGCTTCTCTTATGTTACCTTGCTCTCAATCCTACACATACTCATAAGTATATTGTTCAAGCTTTCACTCACCTCCTTGTCGACCTTTTATCTTCCTCCTCCTCCTCCTCTTCATCCTTCTCCTCTTTGTCGCCACCTTCACCACCTTCTCGGAATCTCAATAACAGACTCTGA 681 0.4611 MFFSLSHSLTHCAKMPSLFSKQLHLCFFKLKYPTILSQPHSQQSTTPSPSPSPPYTFHFNTTFTHHHHHHEEDYFSDDTTELPPPDFASVFASQRFFFSSPGSSNSITESESPPNDTPPYNSLIPKGGSVKRVPKYSVNPYVDFLRSMQEMIQSQEQVFDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDLLSSSSSSSSSFSSLSPPSPPSRNLNNRL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04174 226 MobiDBLite consensus disorder prediction 102 126 - -
Vivi1g04174 226 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 201 IPR038933 GO:0045892
Vivi1g04174 226 NCBIfam uncharacterized plant-specific domain TIGR01568 135 200 IPR006458 -
Vivi1g04174 226 ProSiteProfiles OVATE domain profile. 133 197 IPR006458 -
Vivi1g04174 226 MobiDBLite consensus disorder prediction 205 226 - -
Vivi1g04174 226 MobiDBLite consensus disorder prediction 102 117 - -
Vivi1g04174 226 Pfam Transcriptional repressor, ovate 137 198 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04174 Vivi-Chr1 88522615 88523729 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi1g04174 Ovate 3.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04174 - - vvo:131611687 357.451