Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04172 ATGGAAATTGATGAGTTGAAATCAGGCATGATTAAGCTTACCGAGATGATGCAAGTGTTGATGGCTAGGACTGATCCACCTCAGAGGACTGTTATTTCTGAAGTCTCCACTGTTGTTGTTGATCCTTTACAGGTTCAGAAGCCACCTTCTACTTGGCCAGAGTTTGGGTTACCTGAGAATTTCTCTCCAACATATGTTAATGCTTCTATGGTGGGTCAAACTTCGAGGCAGATATTCCAACCTCCGGTCTTTTCTGAACCTCCACCTGTTGTTCATACTACTGCTCAAGCTGTTCCAGCTCGTTATGAAAATCCTCTCTATGATTACCGTTCTGTTGGTTCTCGAAGTGTTAGTCAAGGAGATTGTGGTGAAGTTGAAGAAGTCCGTGAGCAATATCAGGCATTGGAAAAGAGGCTAAGAGCTATGGAAGGAAGCAATTTCTTTAGTGTGAATGCTGATAACATGGGTCTTGTTTCAAATCTTGTCATGCCTTCCAAGTTCAAATTAAGAAAATTAGTGTTTGTTGAAGAAGGTGGTAGTAGTGTTAATATCAATCTTTTGGCAAACATGGCTAGTCCAATTTCGCATGTTCTTCAAGGTCCATGGTTCACAATATTTGCCTCCATTTTGATCATGGCAGCAGCAGGTTCTGGCTACATGTTTGGCATTTATTCAAGTGATATCAAATCCTCTCTTGGCTATGATCAAACCACTCTCAATCTCCTCAGTTTCTTCAAAGACTTAGGCTTCAATGTTGGTGTTCTTTCAGGCCTACTCATGGAGGTAACCTCACCTTGGTTCATTCTCTTGATTGCTGCCCTTCTTAATTTCTTTGGCTATTTCATGATTTACCTTGCTGTAACGAAAAGGATATCGACGAATCTTTGGCAAATGTGTTTCTATATTTGCGTTGGTTCGAATTCTCAAGCGTTTGCGAATACTGCAGTTATTGTGACGAGTGTGAATAACTTTCCTGAGAGCCGAGGAGCTGTTTTGGGGCTTCTTAAAGGCTTTCTTGGCCTAAGTGCTGCGATTATTAACCAACTTTATCAGGCCATTTTTTTTCATGATTCGAAAGCTTTGATTCTGCTTATTGCTTGTTTGCCTGCTGTGATTTCGATTGCTTCTCTACGAACAATTCGGTTTATTAAGGTTGTGAAAGTGCCAAATGAGCTTAGGATTCTGTATAGGTTCTTGTATGCATCTCTTTGTCTCGCTGGTTTTCTCATGATCATTATCATAGTCCAGAAGAAGACGAACTTTACTCGAGCTGAGTATGGTGTCAGTGCTGCTATCACCACAATCTTGTTGTTTTTGCCTCTTGTTATTGCTGTAAAAGAAGGATTTGGTTCTTGGAAGAGAAAAAAACAGGTCTTGCATAAGGCTCCGGAAATTAAGGTTGTAACAGAGAAGGCGAATTCTGAGGAGCCGCCTATAGCATTAACAACCAACGAAGGACAAAATCAAGAAATCTCATGCTGGAAAATGGTGTTCCAGCCACCATCTTATGGGGAGGATTATACCATCCTTCAAGCACTCTTCAGCATAGATATGTTGATTCTGTTCGTGGTGACTATTTCAGGTGCTGGAGGAACGTTGACTCTAATTGACAACTTGGGACAGATTGGTTCTTCACTTGGCTACCCGAAAACGAGTATCAACACATTTGTGTCACTTTTGAGCATATGGAACTACCTAGGAAGAGTGGTGTCTGGGTTTCTATCAGAACATTTCTTGGCAAAATACAAATTCCCTCGTCCGCTTATGCTCAGTATAGTTCTTGCAGTACCATGTGTCGGCTATCTTCTCATCGCCTTCGATGTCCCAAATGGTTTGTATGTTGCATCATTGATCATAGGATTTTGCGTGGGAGCGCAATGGCCACTACAATACGCCATCATTTCTGAGATTTTTGGCCTCAAGTACTACTCGACTCTGTACAATTTTGGGTCAGTAGCTAGTCCAATAGGTCTGTATGTGCTCAATGTGAAGGTTGTTGGGAATTTATATGACAAGAAAGCTGAAAGGCAACTAAGAGCATTGGGACGTGTTCGAAAACATGGGGAGGCCTTGGATTGCAATGGAGTCGAATGCTTCAGGTTGGGCTTCCTAATAATCACTGCTGTTGCTGCTTTTGGTGCAATGGCTTCAATTATATTGGTGATTAGGACAAGAAAGTTTTACAAAGGTGATATATATAATAAATTTCGAAGGGAAACCAAGGCAGCAGAGGATACTGAAATGGTTTCTACTACTAAGTGA 2262 0.4129 MEIDELKSGMIKLTEMMQVLMARTDPPQRTVISEVSTVVVDPLQVQKPPSTWPEFGLPENFSPTYVNASMVGQTSRQIFQPPVFSEPPPVVHTTAQAVPARYENPLYDYRSVGSRSVSQGDCGEVEEVREQYQALEKRLRAMEGSNFFSVNADNMGLVSNLVMPSKFKLRKLVFVEEGGSSVNINLLANMASPISHVLQGPWFTIFASILIMAAAGSGYMFGIYSSDIKSSLGYDQTTLNLLSFFKDLGFNVGVLSGLLMEVTSPWFILLIAALLNFFGYFMIYLAVTKRISTNLWQMCFYICVGSNSQAFANTAVIVTSVNNFPESRGAVLGLLKGFLGLSAAIINQLYQAIFFHDSKALILLIACLPAVISIASLRTIRFIKVVKVPNELRILYRFLYASLCLAGFLMIIIIVQKKTNFTRAEYGVSAAITTILLFLPLVIAVKEGFGSWKRKKQVLHKAPEIKVVTEKANSEEPPIALTTNEGQNQEISCWKMVFQPPSYGEDYTILQALFSIDMLILFVVTISGAGGTLTLIDNLGQIGSSLGYPKTSINTFVSLLSIWNYLGRVVSGFLSEHFLAKYKFPRPLMLSIVLAVPCVGYLLIAFDVPNGLYVASLIIGFCVGAQWPLQYAIISEIFGLKYYSTLYNFGSVASPIGLYVLNVKVVGNLYDKKAERQLRALGRVRKHGEALDCNGVECFRLGFLIITAVAAFGAMASIILVIRTRKFYKGDIYNKFRRETKAAEDTEMVSTTK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04172 753 Gene3D MFS general substrate transporter like domains 513 728 IPR036259 -
Vivi1g04172 753 Coils Coil 125 145 - -
Vivi1g04172 753 CDD MFS_Mch1p_like 200 714 - -
Vivi1g04172 753 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 202 731 - -
Vivi1g04172 753 Pfam Nodulin-like 201 444 IPR010658 -
Vivi1g04172 753 SUPERFAMILY MFS general substrate transporter 201 727 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04172 Vivi-Chr1 88458171 88478978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04172 188 739 Nodulin-like Gene Family AT2G39210 62.791 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04172 - - vvo:131648779 1467.6