Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04156 ATGGAAGAATATAGAGCATTTGATGAGTATGATGGAATAGAAGTGGCATGGAATCAAGTAAAGCTTTATGACTTTTTGAAAAATCCTCAAGACCTTGAGAGGTTATACTGTGAAATTCATCTTCTCAAGACATTGAAGCATAAGAACATCATGAAGTTTTACACTTCTTGGGTTGATACTACTAATAGACACATTAATTTTGTTACTGAGATGTTCACCTCCGGTACTCTAAGACAGTACAGACTTAAACATAAAAGAGTTAACATAAGAGCTGTTAAGCATTGGTGCAGGCAGATTTTGGAAGGTCTCCTCTATCTCCATAGCCAGGACCCACCTGTGATCCATAGAGATCTCAAATGCGATAACATTTTCATCAATGGTAACCAAGGAGAAGTCAAAATCGGTGATCTTGGCCTCGCTGCAATTCTCCGCAGATCGAATGCTGTTCACTGTGTTGGAACACCCGAGTTTATGGCTCCGGAAGTGTATGAAGAACATTACAACGAATTGGTTGACATATACGCTTTCGGAATGTGTATATTGGAGATGGTTACCTTTGAATATCCTTATAGCGAATGTAACCATCCTGCTCAAATTTACAAAAAGGTTGTCTCGGGGAAAATGCCAGAATCATTTTACAAAATAAATGATCAAGAGGTTAAGCAGTTTGTAGAGAAATGCTTGGCAACTGTTTCCCTTAGGCTTTCAGCTAGGGAACTCTTAGATGACCCTTTTCTCCAAATTGATGATTATGGATCTGACTTGAAAGAAGTTCAGTATCAAAGAGGTTGCTATGAAGAAACACCAACGATTCGACAAACTGTGAATGGAAGTTATAGCAATAACTTAATGAGTTTGTACACTGATAATTCTGGTGGTTATCAAAATGATTTTGATCTCTTTGATTGTGAAGAGGATGATAATTTGGATAAAGTTGATACCTCGATCAAAGGTAGGAGAAGAGATGATGGCGTCTTTCTTAGAATCAGAATACCAGATAAAGAAGGTCGAGTTCGAAACATCTACTTCCCGTTCGACACGGAGACTGATACTGCATTGAGTGTTGCGTATGAAATGGTAGCCGAGCTTGACATAACTGACCAAAATTTAACAAAATTAGCGAATATGATAGATAATGAAATTGCAAATTTGGTACCGGGATGGAAAATTGGACCAAGAATAGATGAAGTTTCAGAAGCTTCAAGTGCAAGTTTCTGTCTCAACTGTGCTGCAAACAATACCTTAGTTGATTATGTATCATCGAATAATCCATGTGCCAAGAATCTTCAATTTTTCCATTGTTCTAAAAACGGATGTGCCGCGGTTCACGGCCGATTCGAGGAGATTACGTATCAATACGAAGGGTCTGCCAACACTGCTACAGAAGCTGAACCACCAAGTCAATCCAATGGCATTCATTATGCTGATATCTGGGGTCAGCGAGACGAACAACAGTCAAATCATGAAGGATTGAAAGACATTCATTGCGACGATTCTCATGAGAAATCTAAACTATCACTCATAAAAGAGGATGAAGAGGAGAATAATGTTGATGCAGATGACCAAATTTATCTTAATACCAAAAAGCCTCCTTCTAGCCCTGCAGCTTCAGAATGTTCATTATTCTTGGACTACGAAAACGATATAAGGCATGAACTTCGATGGCTCAAAGCAAAGTACCAAATGCATTTAAGAGATCTTAGAGGCCATCAACTAGGTAGTAGTACTAAACCAAAATCTACTTGCACATCTCCTGAAACTATAAAACTAGAGCATGGAAAAAATGGATTTCTGAGACCACCAGCTAAATTGCAAAACAATAACTCATTATCGATAGACGTTGATGCTGCAAAGTGCAACACTCTGAATGACCAAATTATTCCAAGTATTGCTTGTGATACAAGTCAGCTTAACAATTCTCAACAAATGGTCACGGCCAAGGATTTCTTCGCAGGAGCCTTGCTTCCAAACTCGCTTCAAAGGGCAACCTCGCTTCCAGTCGATGCAGTTGATGTCTAG 2019 0.3893 MEEYRAFDEYDGIEVAWNQVKLYDFLKNPQDLERLYCEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSQDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRRSNAVHCVGTPEFMAPEVYEEHYNELVDIYAFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKMPESFYKINDQEVKQFVEKCLATVSLRLSARELLDDPFLQIDDYGSDLKEVQYQRGCYEETPTIRQTVNGSYSNNLMSLYTDNSGGYQNDFDLFDCEEDDNLDKVDTSIKGRRRDDGVFLRIRIPDKEGRVRNIYFPFDTETDTALSVAYEMVAELDITDQNLTKLANMIDNEIANLVPGWKIGPRIDEVSEASSASFCLNCAANNTLVDYVSSNNPCAKNLQFFHCSKNGCAAVHGRFEEITYQYEGSANTATEAEPPSQSNGIHYADIWGQRDEQQSNHEGLKDIHCDDSHEKSKLSLIKEDEEENNVDADDQIYLNTKKPPSSPAASECSLFLDYENDIRHELRWLKAKYQMHLRDLRGHQLGSSTKPKSTCTSPETIKLEHGKNGFLRPPAKLQNNNSLSIDVDAAKCNTLNDQIIPSIACDTSQLNNSQQMVTAKDFFAGALLPNSLQRATSLPVDAVDV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04156 672 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 578 - -
Vivi1g04156 672 SMART serkin_6 4 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04156 672 Gene3D Phosphorylase Kinase; domain 1 2 70 - -
Vivi1g04156 672 CDD STKc_WNK 4 246 - -
Vivi1g04156 672 Pfam Protein kinase domain 4 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04156 672 Gene3D Transferase(Phosphotransferase) domain 1 72 251 - -
Vivi1g04156 672 SUPERFAMILY Protein kinase-like (PK-like) 4 247 IPR011009 -
Vivi1g04156 672 FunFam probable serine/threonine-protein kinase WNK9 72 251 - -
Vivi1g04156 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Vivi1g04156 672 ProSiteProfiles Protein kinase domain profile. 1 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04156 672 FunFam Probable serine/threonine-protein kinase WNK1 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04156 Vivi-Chr1 88272613 88276143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04156 4 593 MAP Kinase Kinase Kinase AT3G22420 49.365 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi1g04156 Pkinase 8.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04156 K08867 - gmx:100804179 990.719