Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04066 ATGGAAGTGTCATCAAAGACTAACAAACACAGCAGGACGTCTTTCCAACCCATCTTTCTCCTTATTCTTGTTTGCTTTATGAATTTTGCAACTGCTAAAGCAAAGAACGATGATGATATTCCATCGGTGTCTTGCTCAGACAACAATGAAACTACTCCAAATAGTGTGTTTCAGTTGAATCTCAAGAGCCTTCTCTCATATTTATCTTCCAACGCTACTGCCAACAAAGAGTTCTACAGCACCACAGTAGCAGACATAAACAACTCCTCCAATACAGTCTATGGTATGTTTATGTGCATGGGTGATGTCCCTGCTCATCTATGTAGTCAGTGTGTTACATATATGACTCATTACAATTTATCAGACTCAGTAATAAACTCTGATTGTTCCCTGTCCAAAGAGGTTGTGATGAGCAATGACAATTGCATGGTCCGATATTCCAACAACTCATTCTTGTCCACTGCTGACTTAATTCACTATTCTAGCTCTTGCACCTCTGTCAACATGTCAAATCAGGCAATACTTGAGGGTTTAGTTTCTGAAACTTTGAATGGAGTGGCAGATGAGGCAGCCAATTTTTCAACTGGAGTCAAGAAATACGCTACAAAGGAAGCAATGATATCTGAATTTCAAACCCTTTATTTTCAAGCTCAGTGCACACCTAACCTGTCACCACAAGATTGTCGAAAATGTCTGAATGGAACCATAAAGTGGTTACTTCAGTCTTGTGAAAGTAAAAGTAGCAATATAATAGTAGGGAACTCTGAAACCTACAGTTGTTACATCAGAAATGATTTGTACCCTTTTTATCGCCCTAGTAATGCTCCAACCCCACAAGAACTTGTCCCAGCTTCCAATACAATTGATTCAAAATACTCGCAGCATCTTTCTTATCTTTCCCACAATTGCTCAAGCAATGAAAGCATGAATTATGATTTTCAGTTACATCTCACAACATTATTCTCTTTTCTATCTTCAAATGCCACCGAAACTAGTTTTTTCAAGACGACTGTGGACACATTCCATGGTCTCTTTATGTGTCGTGGTGATATATCCCTCTCCCCAACCATGTGTCAGTTATGTGTCCAATATGCAATCAAAAGAATATCATCAGAGTGCCCTTCCTCCAGTGAAGCTGTAATTTGGTACGATAAATGCTTACTCCGTTATTCCTATCATTTTCTCATTTCAGATATTGATACAACCGTACCTAAATTTCACCAATTCAATATGGCCAATACTTCTCACCTCAACATGCTGCAAAGCTTCACTAATTGGAAACTTGCAGATATTTTATCTGAAGTGCCAAATTTGCAGACAGGAGATAGTTCTATAAAGAATTATGAAACAACATCGGTAAAATTAAATAAACGTCAAACCATTTACACTCTTGCTCAGTGTACACCAGATCTGTCTGATGAGGATTGTGACTCTTGCTTGCAAAGCATTTTCCAGAACGAAATTCCTTGGAATAGTTTGGCAAGTCCCGAGGGGAAAATTCTATATCCAAGCTGCTATATGATGTTTGGATTGTCCCAATTCTACAACAATGGTGATGAAGCAGAGGAGTTTGGGCATGTTAATCCTCCTCCAACAACTAAAGAAAATGAAAAAAGAAGCTTCCGAACGATCGTAGTTGTTGTCCCGACCATCCTTTCAACATTACTATTAGCTTTTTCCTGCTATTTGCTAAGGAAAAGAGCGAGAAAGATTGGTCATGAAAGTACCACTTTAGAGGGTTTGCAATTCGAAATGGCTATAATTAAAACTGCAACAAACAACTTTTCACATGAAAACAAGATTGGCGAAGGTGGATTTGGACAAGTTTACAAGGGAATTCTTTCTGATGGAAGACACGTAGCTGTTAAGAGACTCTCATCAAGTTCAAATCAAGGCATAGTTGAGTTCAAGAATGAAATTTTATTGATAGCCAAGTTACAACAAAGAAATCTCGTGGCATTAATAGGCTTTTGCCTAGAAGACAAAGAGAAGATTCTTATTTATGAATATGTGCCAAATGGGAGCCTTGATTACTTATTATTTGATACTCAACAACAATGTTTAAGTTGGGATGCACGTTACAAAATTATTGGAGGAACGGCTTTAGGAATTCTTTATTTGCATGAATATTCTCGTCTCAAAGTCATACATCGGGATCTTAAACCAAGTAATGTTCTATTAGATGAAAATATGAATCCTAAAATATCAGATTTTGGCATGGCTAGAATGGTTCAAATAAATGAAGATCGTGGACATACAAACAAAATTGCTGGAACTTGGGGTTACATGTCTCCAGAATATGTAATGTTTGGACAATTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGTGTCATTGTTTTAGAGATTATTACTGGAAAAAGAAATATAAGTCCTTACGATCCACATCATATTGCCGAAGGCCTCACAAGTTATGTATGGAGACAGTGGATAAATGAAACTCCATTAATCATATTGGATTCAAAAATAGAAAATTATTCTTTTATTGAAGTTATTAAGTGCATACAGATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGTCAGACCAACAATATCAACGGTTGTTTCATATCTCAACAGTCATTCACCAGAATTGCCATCACCACAAGAACCAGCATTTTTCATACACAGCAGAATGAATCAAGAAGTAACTGCACAAATGGAATCAAGTTCTGCCAACAATTTTGTATCATATTCCGTTAACGAGATGTCTATAAGTGAATTTTATCCTCGACAATAG 2760 0.3681 MEVSSKTNKHSRTSFQPIFLLILVCFMNFATAKAKNDDDIPSVSCSDNNETTPNSVFQLNLKSLLSYLSSNATANKEFYSTTVADINNSSNTVYGMFMCMGDVPAHLCSQCVTYMTHYNLSDSVINSDCSLSKEVVMSNDNCMVRYSNNSFLSTADLIHYSSSCTSVNMSNQAILEGLVSETLNGVADEAANFSTGVKKYATKEAMISEFQTLYFQAQCTPNLSPQDCRKCLNGTIKWLLQSCESKSSNIIVGNSETYSCYIRNDLYPFYRPSNAPTPQELVPASNTIDSKYSQHLSYLSHNCSSNESMNYDFQLHLTTLFSFLSSNATETSFFKTTVDTFHGLFMCRGDISLSPTMCQLCVQYAIKRISSECPSSSEAVIWYDKCLLRYSYHFLISDIDTTVPKFHQFNMANTSHLNMLQSFTNWKLADILSEVPNLQTGDSSIKNYETTSVKLNKRQTIYTLAQCTPDLSDEDCDSCLQSIFQNEIPWNSLASPEGKILYPSCYMMFGLSQFYNNGDEAEEFGHVNPPPTTKENEKRSFRTIVVVVPTILSTLLLAFSCYLLRKRARKIGHESTTLEGLQFEMAIIKTATNNFSHENKIGEGGFGQVYKGILSDGRHVAVKRLSSSSNQGIVEFKNEILLIAKLQQRNLVALIGFCLEDKEKILIYEYVPNGSLDYLLFDTQQQCLSWDARYKIIGGTALGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGMARMVQINEDRGHTNKIAGTWGYMSPEYVMFGQFSEKSDVFSFGVIVLEIITGKRNISPYDPHHIAEGLTSYVWRQWINETPLIILDSKIENYSFIEVIKCIQIGLLCVQENPNVRPTISTVVSYLNSHSPELPSPQEPAFFIHSRMNQEVTAQMESSSANNFVSYSVNEMSISEFYPRQ 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04066 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Vivi1g04066 919 SUPERFAMILY Protein kinase-like (PK-like) 584 898 IPR011009 -
Vivi1g04066 919 Pfam Salt stress response/antifungal 45 148 IPR002902 -
Vivi1g04066 919 Pfam Salt stress response/antifungal 303 391 IPR002902 -
Vivi1g04066 919 Pfam Salt stress response/antifungal 180 264 IPR002902 -
Vivi1g04066 919 Pfam Salt stress response/antifungal 427 509 IPR002902 -
Vivi1g04066 919 ProSiteProfiles Gnk2-homologous domain profile. 295 395 IPR002902 -
Vivi1g04066 919 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 564 670 - -
Vivi1g04066 919 CDD STKc_IRAK 601 866 - -
Vivi1g04066 919 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Vivi1g04066 919 ProSiteProfiles Gnk2-homologous domain profile. 405 514 IPR002902 -
Vivi1g04066 919 FunFam cysteine-rich receptor-like protein kinase 10 671 872 - -
Vivi1g04066 919 ProSiteProfiles Protein kinase domain profile. 595 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04066 919 SMART serkin_6 595 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04066 919 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 155 914 - -
Vivi1g04066 919 ProSiteProfiles Gnk2-homologous domain profile. 157 269 IPR002902 -
Vivi1g04066 919 ProSiteProfiles Gnk2-homologous domain profile. 39 151 IPR002902 -
Vivi1g04066 919 Pfam Protein kinase domain 596 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04066 919 Gene3D Phosphorylase Kinase; domain 1 561 670 - -
Vivi1g04066 919 Gene3D - 406 514 IPR038408 -
Vivi1g04066 919 Gene3D - 39 151 IPR038408 -
Vivi1g04066 919 Gene3D - 157 269 IPR038408 -
Vivi1g04066 919 Gene3D - 292 394 IPR038408 -
Vivi1g04066 919 Gene3D Transferase(Phosphotransferase) domain 1 671 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04066 Vivi-Chr1 86517473 86521747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04066 297 918 Receptor kinase-like Gene Family AT4G05200 41.248 3.02e-158 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g04066 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04066 - - gmx:100785282 1034.25