Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04037 ATGAAAAAGCAAAACTTCAAATCAAGAATCCTACACCCTCATCTCACCTTTATAACACACCCTCACCTCATTTTCATCATTCACATTCATACAAAACTTTTTTTCATAATAGTATCTCAAGCCAAAGGCGCCGGAGATCCTGCATCATGTGTTAACAAAAGAGGCAATTACACAGCCAATAGCACCTACGACAACAACCTCAAAACCCTTATATCTAGTTTCTCTTCCCATAAAGAAATCAACTACGGTTTCTACAATTTCTCGTATGGCCAGGATCCAAACAAAGTATATGCCATTGGAATGTGTAGTGGAGATGTTAAGCCAAATGAGTGTCTAACATACATAAACAGTTCTTTTGCCTATCTTAGAGAGCAGTGTCCAAATCAAAAAGAGGCGATTGTTTGGGGTGGGAGTTTAACTTTGTGGTACTCAAACCGCTCAATATTTAGGATAGTGGAAACCGAACCTTCAATGGGTTTGGTATCTTCGGGAGCTGTAACTGACATGGACAAGTACAACAATACACTGAATAAACTCTTGACAGATCTTAAAGACAAAGCTGCATCAGGTGACTCCCGTCGTAAATATGATGCAGATAAGTCTGAGTATGCAGATTTTGCAACTTTACATGGTTCAGTGCAGTGTGTGCCTGAATTGTCGTCGCAGCAATGTATTGGTTGCTTGGAAGCAATAATATCAGAAATTCCATTTTGTTGTAATGGCACGACCGGTGGACGACTTCTTCAACCAAGTTGCCGTCTCAGATATGAAACTTATAGATTCTATGATTCTACCATTGAGTTAGACTCAGTTGCAACTCCACCATCCACCAATAACATTTCTTCAGGTCACAACAAAACACCTACTGTCATCGCCATAGCTGTGCCATCCGCTTTTGTGGTTTTGGTAGCTATTCTTATATGTTTCTGTTTGCGGGTGAGAAAACCAAAACACAGTTTTGAAGCTTACATGGGAAAATATGATGATGGAGATGAAGAGGAAATGACGAATGTTGAGTCCTTGAGATTTAACCTTAAGGCCATACTAGTTGCTACAAATGGCTTCTCTGATTCTAATAAAATTGGACAAGGTGGATTTGGAGTGGTTTATCGGGGTAAACTGCCTAATGGACACATGATTGCAGTTAAAAGGTTGTCGATAAATTCTTCCCAAGGAGATGGGGAATTTAAAAATGAAGTACTATTAGTAGCGAAGCTTCAGCATCGAAACTTGGTTAGATTACAGGGTTTTACTTTAGAAGGAAGGGAAAGGCTATTAATTTATGAATATGTTTCAAATAAAAGTCTTGATTTCTTCATATTTGATCCTACCAGGAAAGCACAAATGAATTGGGAAAAGCGTTTCAATATAATAAAAGGTGTTGTTCGAGGTCTTCTTTATCTTCATGAAGATTCTCGTCTGCGCATTATACATCGTGATCTCAAAGCAAGCAATATTCTATTAGATGATGAGATGAATCCTAAAATATCTGATTTTGGATTGGCAAGATTGTTTGTTATAGGTCAAACTCAAGGAAGTACAAATAGAATCGTTGGAACCCATGGATATATGGCACCAGAGTATGTGATGCACGGTGAATTTTCAGTAAAATCAGATGTGTTTAGTTTTGGAGTATTAGTTCTTGAGATTATAAGTGGTCATAAAAATAATGCAAGCATTTGTCATGGGGTGAATATGGAATATCTATTGAGCTATGCATGGAGAAGCTGGTTAGAGGGGAACGCAGCTAATATTATAGATCCATCATTACACAATAGTTCACAAAATGAAATAATGAGATGCATTCATATTGGTTTACTCTGTATTCAAGAAGACTTAGTTGACAGACCAACCATGGCTTCTGTTGCACTTATGCTTGATAGTTATTCTCTCACTCTCTCGACACCTTCCAAACCAGCATATTTTATGGGAAGTGGATCTAAGAGGCTTCCAAATATGGAGCTACTCGTTGATGATGCAGCTGCAACAAGAATTGATGAATCAATTAACCAAGTTTCAATTACTGAACCATACCCTCGTTAG 2043 0.3798 MKKQNFKSRILHPHLTFITHPHLIFIIHIHTKLFFIIVSQAKGAGDPASCVNKRGNYTANSTYDNNLKTLISSFSSHKEINYGFYNFSYGQDPNKVYAIGMCSGDVKPNECLTYINSSFAYLREQCPNQKEAIVWGGSLTLWYSNRSIFRIVETEPSMGLVSSGAVTDMDKYNNTLNKLLTDLKDKAASGDSRRKYDADKSEYADFATLHGSVQCVPELSSQQCIGCLEAIISEIPFCCNGTTGGRLLQPSCRLRYETYRFYDSTIELDSVATPPSTNNISSGHNKTPTVIAIAVPSAFVVLVAILICFCLRVRKPKHSFEAYMGKYDDGDEEEMTNVESLRFNLKAILVATNGFSDSNKIGQGGFGVVYRGKLPNGHMIAVKRLSINSSQGDGEFKNEVLLVAKLQHRNLVRLQGFTLEGRERLLIYEYVSNKSLDFFIFDPTRKAQMNWEKRFNIIKGVVRGLLYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGLARLFVIGQTQGSTNRIVGTHGYMAPEYVMHGEFSVKSDVFSFGVLVLEIISGHKNNASICHGVNMEYLLSYAWRSWLEGNAANIIDPSLHNSSQNEIMRCIHIGLLCIQEDLVDRPTMASVALMLDSYSLTLSTPSKPAYFMGSGSKRLPNMELLVDDAAATRIDESINQVSITEPYPR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04037 680 ProSiteProfiles Protein kinase domain profile. 355 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04037 680 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Vivi1g04037 680 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 677 - -
Vivi1g04037 680 Pfam Salt stress response/antifungal 50 145 IPR002902 -
Vivi1g04037 680 Pfam Salt stress response/antifungal 167 259 IPR002902 -
Vivi1g04037 680 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 46 148 - -
Vivi1g04037 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Vivi1g04037 680 FunFam Cysteine-rich receptor-like protein kinase 10 317 430 - -
Vivi1g04037 680 Gene3D - 157 261 IPR038408 -
Vivi1g04037 680 Gene3D - 47 147 IPR038408 -
Vivi1g04037 680 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04037 680 Pfam Protein kinase domain 356 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04037 680 ProSiteProfiles Gnk2-homologous domain profile. 45 148 IPR002902 -
Vivi1g04037 680 FunFam cysteine-rich receptor-like protein kinase 10 431 633 - -
Vivi1g04037 680 FunFam Cysteine-rich receptor-like protein kinase 10 156 261 - -
Vivi1g04037 680 Gene3D Transferase(Phosphotransferase) domain 1 431 636 - -
Vivi1g04037 680 SUPERFAMILY Protein kinase-like (PK-like) 337 626 IPR011009 -
Vivi1g04037 680 Gene3D Phosphorylase Kinase; domain 1 321 430 - -
Vivi1g04037 680 ProSiteProfiles Gnk2-homologous domain profile. 154 261 IPR002902 -
Vivi1g04037 680 CDD STKc_IRAK 361 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04037 Vivi-Chr1 85471318 85475472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04037 46 645 Receptor kinase-like Gene Family AT4G21410 49.919 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g04037 Pkinase 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04037 - - mtr:11442310 905.975