Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03966 ATGTTTCAATCACCGTCATTCTCTACTAGCAACAATTCTCAATATCCTCGTCTGTTTATGTTTCAACCACCACCACCCAACATCACTAGCCAATATACACATTCAATGGGTACCAACGACGTTGTAGAGTCTCCTAATGTTGAATCAGAATCACCAATTGGTTCCACTACAGATTCTCAGGTGCCAGTGTTCTCCACTCAAGATGGTCTAGAAAATATTACTTTTGCAGAAGAAGGAGAACGTTCAACCCAAAAGAAACAGCGTGTCAGGTTCTTAGAAGAAGAAGATAAATTGCTTATCCAGACATGGCTTAACATTTCAAAAGATTCAGTTGTGGGAGTTGACCAAAAAGCTGATAGTTTTTGGAGTAGAATCAAAGAGGGCTATAACAACTATCGTGGACCACTTACAGTGAGAGACTACAAACTAGCTGTTGCTAATAAGAAAAGTGGACAATCGGAGACCGACGTCATGGATGAGGCACGTAAAAAATTTGTACAAGTACGTCATCAACGTTTCACAATGGAGCATGCATGGAGGTTGTTGAAGGATGAACCTAAATGGAAGGGACAAGAAATGAACAACTCTTCAAAGAGATCAAAGATATCCTCTGACGGGACATATTCATCGACATCTAATTCAAAAATTCCCATAGATTGTTCAGAATACAATAGTGTAACTCAGACCGACCGCCCAACAGGACAAAAGGCGACAACAAGGAAGGGTAAGGGAAAATCATCTACGTCTATAGTACCCATAGTGGATTTGACTGGCTTGGAAAATGTCGTAGAAAAGAAATTATCTATCTATGGTAAAATAGATGAAGCAAGGTTGGCAGAGAGCATACCCATGTTGTATGAAATTCTCATGAAGGACAAATCAACAATGAATGATGAGCAACGTCAAGAGCATGAAGAAATTTGTCAAAGCATCAAGGAGAAGTATTTCAAGAAAACTTAG 960 0.3937 MFQSPSFSTSNNSQYPRLFMFQPPPPNITSQYTHSMGTNDVVESPNVESESPIGSTTDSQVPVFSTQDGLENITFAEEGERSTQKKQRVRFLEEEDKLLIQTWLNISKDSVVGVDQKADSFWSRIKEGYNNYRGPLTVRDYKLAVANKKSGQSETDVMDEARKKFVQVRHQRFTMEHAWRLLKDEPKWKGQEMNNSSKRSKISSDGTYSSTSNSKIPIDCSEYNSVTQTDRPTGQKATTRKGKGKSSTSIVPIVDLTGLENVVEKKLSIYGKIDEARLAESIPMLYEILMKDKSTMNDEQRQEHEEICQSIKEKYFKKT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03966 319 MobiDBLite consensus disorder prediction 195 247 - -
Vivi1g03966 319 Pfam No apical meristem-associated C-terminal domain 172 301 IPR029466 -
Vivi1g03966 319 PANTHER - 70 313 - -
Vivi1g03966 319 MobiDBLite consensus disorder prediction 189 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03966 Vivi-Chr1 83591218 83592239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03966 51 251 Glutathione S-transferase Gene Family AT5G41240 30.043 3.03e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03966 - - vvo:131647902 631.328