Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03946 ATGAACATTTTCATTCTTTTTAGCATCACATTAACATGTATTTTTCTACAAAATGTAGTTTTAGATGCAAATTCTATCTCATATGAAGCTTTCTTCAACTTTGGTGATTCTATAAGTGACACTGGAAATGCTGCGACTACATTTCCACCTATGTCTAGCAATAGTCCTTACGGTTCAACTTACTTTAAACATCCATCAGGGCGTTTGTCAAACGGACGTCTTATCATAGATTTCATTGCTGAGGCATATGGATTGCCATTTTTGTCTGCCTATCTCAATATTAGCAAAGACCAAGATATTAAGAAAGGAGTAAATTTTGCATTTGCTGGTGCCACCGCACTTGATGTCGAATATTATGTCCAAAATGGGCTTCCCGTTCCAGACACAATTAACTCATTGAAAGTTCAACTTGGATGGTTTAAGAAACTTAAACCCACCCTATGTGAAAGCAAAGAAGATTGCAATGCCTACTTCAAGAAATCATTGTTTATAGTCGGTGAAATTGGTGGAAACGATGTTTTCAAACATATGGTGAAGCATAAAACTGTTATAGAAATTCGAGAAATAGTTCCCTCTATAGTTGAAGCAATTATTAACACCACAAATATGTTAATTGAAGAAGGAGCTGTGGAGTTAGCCGTTCCAGGGAACTTTCCATTGGGGTGTAATGCTGGCGTATTGACATCTGTGAATAGTAAAAAGAAAGAAGACTATGATGAATTTTGGTGTTTGATTGCTTACAATAATTTAGTCGAGTATTTTAATGAACAACTAAAAAATTCTTTAGAAACACTAAGGCATAAATACCCTGAAGTTAAGATAATATACTTTGACTACTACAATGATGCCAAACGTTTATATCAAAACCCGAAAGAATATGGCTTTATTCGTAGTGATATCGTCAAAGTATGTTGTGGTGGAGGAGGGGGAGGACCATGTGGAACACCTTCTGCAAGAGTTTGCTCCGACCCTTCAAAACGTATAAATTGGGACGGACCTCATTTAACTGAAGCAGCTTATAAGCTAATAGCAAAAGGACTAGTCGAGGGTCCATTTTCAAATCCATCTCTTAAACCCTCTCTTTTCAAGATAGCTTAG 1098 0.3634 MNIFILFSITLTCIFLQNVVLDANSISYEAFFNFGDSISDTGNAATTFPPMSSNSPYGSTYFKHPSGRLSNGRLIIDFIAEAYGLPFLSAYLNISKDQDIKKGVNFAFAGATALDVEYYVQNGLPVPDTINSLKVQLGWFKKLKPTLCESKEDCNAYFKKSLFIVGEIGGNDVFKHMVKHKTVIEIREIVPSIVEAIINTTNMLIEEGAVELAVPGNFPLGCNAGVLTSVNSKKKEDYDEFWCLIAYNNLVEYFNEQLKNSLETLRHKYPEVKIIYFDYYNDAKRLYQNPKEYGFIRSDIVKVCCGGGGGGPCGTPSARVCSDPSKRINWDGPHLTEAAYKLIAKGLVEGPFSNPSLKPSLFKIA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03946 365 Pfam GDSL-like Lipase/Acylhydrolase 32 345 IPR001087 GO:0016788
Vivi1g03946 365 SUPERFAMILY SGNH hydrolase 34 347 - -
Vivi1g03946 365 Gene3D SGNH hydrolase 20 350 IPR036514 -
Vivi1g03946 365 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 355 - -
Vivi1g03946 365 CDD SGNH_plant_lipase_like 30 351 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03946 Vivi-Chr1 83202146 83203919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03946 6 348 Pollen Coat Proteome AT1G75930 26.912 1.62e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03946 - - mtr:25479790 541.191