Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03897 ATGATCGAGGGAGATGAAACAACTCTTGCAGCAACAGCCAAGGAACAACCAGGTGAAGTGATGAACAGAGATAAGAACAGTGATGATGGAAGTGAACATGACGACAACCCCAAAGAGTGGTTAAACTTGAGCTTAGGAGGCACTTCACTCCTGACAGCTGAAGACCCTGATTCACAATCAAGACCAGCCAAAGTTTTTTCGTGCAACTTTTGCATGAGAAAGTTTTTTAGTTCACAAGCATTAGGAGGTCATCAGAATGCTCACAAAAGGGAAAGAGGTGCAGCCAGAAGATATCAATCTCAGAGTCAGAGGACGATGGCACTAATGAGCATGTCCATGAATAATCCAATGTTTCGATCACTTGGTGTCCAGGCTCATTCACTAGTGCATAAGCCATGTAAAGGAGGAACTATGGTGGTTCCAAGCTTTCAAGAAACATATGCAACAGGGCTCGGAATGGCATGTGCACCTTTCACGTCTGAATATCATGCAGACCAGGTGTGGCCAGGTAGCTTTCGTATGGTTTCACAACAGCCCCAGCTACCACAGGAATCACTCAAGCTTGATTTAGACCTCAGACTCTGA 585 0.4513 MIEGDETTLAATAKEQPGEVMNRDKNSDDGSEHDDNPKEWLNLSLGGTSLLTAEDPDSQSRPAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMALMSMSMNNPMFRSLGVQAHSLVHKPCKGGTMVVPSFQETYATGLGMACAPFTSEYHADQVWPGSFRMVSQQPQLPQESLKLDLDLRL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03897 194 MobiDBLite consensus disorder prediction 1 42 - -
Vivi1g03897 194 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Vivi1g03897 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 11 194 - -
Vivi1g03897 194 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Vivi1g03897 194 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Vivi1g03897 194 Gene3D Classic Zinc Finger 49 117 - -
Vivi1g03897 194 MobiDBLite consensus disorder prediction 18 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03897 Vivi-Chr1 82434716 82436555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03897 64 182 C2H2 Transcription Factor Family AT1G24625 42.063 6.65e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03897 - - gmx:100306296 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03897 1 82434716 82436555 Vivi1g03897 1 82434716 82436555 ECH