Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03866 ATGAGATTGAAAATCGCGCTAGGGTCAGCTAAAGGTCTCATGTATCTACACAATGAAGTTGATCCTCCCATATTTCATCGGGATGTCAAGGCCAGCAACATATTATTGGACTCAAAGCTCGCTGCAAAAGTGGCAGATTTTGGACTTTCATGGCTTGCCCCAGTTCCAGATATGGAAGGCATTGTTCCTGGTCATGTATCTACAGTGGTAAAAGGGACACCGGGTTACCTTGATCCGAAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTACAGTCTCGGTGTTGTGTTTCTTGAACTTTTGACCCGAATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCATTCTTTCATACCAAGCTGGCGTAATATTTTCAATCATCGACGAGCGAATGGGGTCAGTAACAATACTGATGTGGGATGTTGATGCAATTATGTGCATTTCTTGGAGCAGTTGTCCCGAATTGGCTTAA 489 0.4294 MRLKIALGSAKGLMYLHNEVDPPIFHRDVKASNILLDSKLAAKVADFGLSWLAPVPDMEGIVPGHVSTVVKGTPGYLDPKYFLTHKLTDKSDVYSLGVVFLELLTRMHPISHGKNIVREVILSYQAGVIFSIIDERMGSVTILMWDVDAIMCISWSSCPELA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03866 162 Pfam Protein kinase domain 5 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03866 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Vivi1g03866 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03866 162 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Vivi1g03866 162 PANTHER RECEPTOR-LIKE PROTEIN 55 2 134 - -
Vivi1g03866 162 SUPERFAMILY Protein kinase-like (PK-like) 2 149 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03866 Vivi-Chr1 82076115 82076935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03866 1 137 Receptor kinase-like Gene Family AT5G01950 72.263 8.27e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi1g03866 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03866 - - vvo:131647533 328.176