Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03812 ATGAAATTGAAACTTAACACCCTCTTGAGAGTTTCATCTTTTTTTGTTCTTCTACTTCTTCAATACTCAGTTGCTCTTAACTCTGATGGAATTTTCTTGCTGAAATTCAGATACTCCATCCTCAGTGACCCTTTATCAGTCTTTGAAAACTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGTAGTGAACTAGGATCTCCTAATACACCTGATTTCTTTAGAGTAACCAGCTTGATTCTACCTAATAGCCAACTTCTTGGTTCCATTGCAGAAGAGTTAGGCTTTATTCAAAACCTTCATCACATTGATCTCTCAAACAATTTCCTCAACGGTTCATTACCAAACTCTATCTTCAACTCTTCTCAACTACAGTTCCTTTCACTCTCCAACAATGTCATCTCAGGTAAACTACCTGAGTTGGTTGGTTTATCAACAAACCTACAAATTCTCAACCTTTCTGAGAATGCCTTTGCTGGGTCAATCCCAGAAAACCTCACTTCTCTTCACAATCTAACCATTGTTTCTCTCAAAAGTAACTATTTTTCTGGTGAAATCCCAAATGGTTTCAACTCTGTTGTGATTCTAGATCTGTCCTCTAATCTACTCAACGGTTCTCTCCCAAGTAACTTCCAAGGCCAAAATCTCCAATACTTGAATCTCTCTTATAACAAACTCTCAGGAGCAATTCCACAAACATTTACAAGGCACATTCCGGAAAAATCTACAATTGATCTCTCATTCAACAACCTAACAGGACCAATACCTGAATCTTTGTTCAATCAAAAAATGGAATCACTCTCTGGAAACTCTGATCTATGTGGAAAACCTCTCAAGACTCTTTGTACTATTCCATCTACTATGTCTACTGCACCACATATCACAAACTCATCTTCACCAGCAATTGCTGCCATACCAAGAACAATCGACTCAGGAAATAACACAAACACATCAACTACAACTACAACTAGTGGTGGTTCACAGAATGGTCTAAAACCTGCTACAATAGCAGCCATTGTTGTTGGAGATATAGCAGGCATGGGAATTTTAGCTCTTATCATACTTTTTGTCTATCAACAAAGAAAGAAAAGATATCCAAAATCAACCAATGTTCTTCAAGAGAAGAATGCATCAGAAACTGTAGCCAAACAAGAACAACAATCTCTGAAAACACACTCACTTCAATGTTCTTCTTGCTGTTTAACAGTTAATCAGCAAGAAGAAACATCAGAAGCAACAACTTCTGATGACAGTGACCGTGAAATCCAGAACCTTCCGAAAGAAGGTACACTGGTAACGGTAGACGGCGAGACTAAGATGGATTTGGAAACATTGTTGAAGGCTTCAGCTTATATACTTGGAACAAGCCGTGCCAGTATTGTGTATAAAGCAGTGTTGCAGGATGGAAGAGTTTTTGCTGTTAGAAGGATCGGCGAATGCGGTGTTGAAAGAATGAAAGAGTTTGAGAATCAAGTTAGAGTTATCGCAAAGATTCGTCATCCTAATTTGGTTAGGATTCGTGGTTTCTGTTGGGGTGAAGATGAGAAGCTTGTTATCTCTGATTTTGTTCCTAATGGCAGCCTCTCTGCTATTGGTTACAGAAGAGGGGGTTTGTCGCCGATGAATTTATCTTTGGAATTGCGGTTGAAGATAGGGAAAGGGATGGCTAGAGGACTTGCTTACATTCATGAAAAGAAATATGTGCATGGAAATGTTAAACCAAGTAACATTTTATTGAATTCTGAAATGGAACCAATTATAAGTGATTTTGGACTTGATTTGCTTCTTCTGAATGATATCAACCATAGAGGAAACGGTTCAGCTAGGCAATTAGTGAACCAGAAAACACAACAGCAACAAGAGTTTCTCATTGGTTCGACTCCGAGTCCGTATACGACAATGGGGTCGTCATCGTCGACGAGTGGCGGTGGTGGTTGCGGTGGTGGTCAAGTACAACAATATCAAGCACCGGAATCTTTCCAAAACATAAAACCAAACGCTAAAATGGATGTGTATTCATTTGGGGTTGTTTTGTTGGAGCTTTTTAGCGGGAGGGTTTTCTCGGACCGGGAATTGGACCAGTGGTCTGTTTCGTCCGGTTCGGTTGAAGAAGATAAAAACCGGGTTTTGAGGTTGGCTGACGTGGCTATTAAACATGAGATTGAAGGTAGAGAAAATGCTGTGTTCACGTGTTTCAAGTTGGGGTTAAATTGTGTTTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAAGTACTACAAACTTTAGAGAAGATTTCCACCGTTGGTTTTAATTAA 2310 0.3957 MKLKLNTLLRVSSFFVLLLLQYSVALNSDGIFLLKFRYSILSDPLSVFENWNYDDATPCSWHGVACSELGSPNTPDFFRVTSLILPNSQLLGSIAEELGFIQNLHHIDLSNNFLNGSLPNSIFNSSQLQFLSLSNNVISGKLPELVGLSTNLQILNLSENAFAGSIPENLTSLHNLTIVSLKSNYFSGEIPNGFNSVVILDLSSNLLNGSLPSNFQGQNLQYLNLSYNKLSGAIPQTFTRHIPEKSTIDLSFNNLTGPIPESLFNQKMESLSGNSDLCGKPLKTLCTIPSTMSTAPHITNSSSPAIAAIPRTIDSGNNTNTSTTTTTSGGSQNGLKPATIAAIVVGDIAGMGILALIILFVYQQRKKRYPKSTNVLQEKNASETVAKQEQQSLKTHSLQCSSCCLTVNQQEETSEATTSDDSDREIQNLPKEGTLVTVDGETKMDLETLLKASAYILGTSRASIVYKAVLQDGRVFAVRRIGECGVERMKEFENQVRVIAKIRHPNLVRIRGFCWGEDEKLVISDFVPNGSLSAIGYRRGGLSPMNLSLELRLKIGKGMARGLAYIHEKKYVHGNVKPSNILLNSEMEPIISDFGLDLLLLNDINHRGNGSARQLVNQKTQQQQEFLIGSTPSPYTTMGSSSSTSGGGGCGGGQVQQYQAPESFQNIKPNAKMDVYSFGVVLLELFSGRVFSDRELDQWSVSSGSVEEDKNRVLRLADVAIKHEIEGRENAVFTCFKLGLNCVSLVPQKRPSMKEVLQTLEKISTVGFN 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03812 769 Pfam Leucine Rich Repeat 219 238 IPR001611 GO:0005515
Vivi1g03812 769 Pfam Leucine Rich Repeat 103 122 IPR001611 GO:0005515
Vivi1g03812 769 Gene3D Phosphorylase Kinase; domain 1 418 526 - -
Vivi1g03812 769 CDD TM_EGFR-like 339 368 - -
Vivi1g03812 769 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 174 764 IPR046959 -
Vivi1g03812 769 SUPERFAMILY L domain-like 32 283 - -
Vivi1g03812 769 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Vivi1g03812 769 SUPERFAMILY Protein kinase-like (PK-like) 456 763 IPR011009 -
Vivi1g03812 769 Gene3D Ribonuclease Inhibitor 196 288 IPR032675 -
Vivi1g03812 769 FunFam Leucine-rich repeat receptor-like protein kinase 26 192 - -
Vivi1g03812 769 Pfam Protein kinase domain 457 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03812 769 FunFam Leucine-rich repeat receptor-like protein kinase 196 288 - -
Vivi1g03812 769 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Vivi1g03812 769 Gene3D Transferase(Phosphotransferase) domain 1 527 766 - -
Vivi1g03812 769 Gene3D Ribonuclease Inhibitor 26 195 IPR032675 -
Vivi1g03812 769 MobiDBLite consensus disorder prediction 311 333 - -
Vivi1g03812 769 MobiDBLite consensus disorder prediction 629 655 - -
Vivi1g03812 769 Pfam Protein tyrosine and serine/threonine kinase 657 760 IPR001245 GO:0004672|GO:0006468
Vivi1g03812 769 ProSiteProfiles Protein kinase domain profile. 451 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03812 Vivi-Chr1 81047015 81050035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03812 25 763 Receptor kinase-like Gene Family AT2G15300 49.157 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g03812 Pkinase 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03812 - - gmx:100820334 969.918