Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03809 ATGGCTACGTTTTCAATCGGAACACACTTGTCCATGTTCCAACATTCGAGGAATTCAAGGCTTTCATCAATTCAATCTTCGCCCACACAATCTAAACCCTTCTTCGCCACTTCTTCTTCTTGTAGAACCAGATTCGGAGTTCCCAATCCCAAGTTACTCCGTAATAATGTATTGGCACGCGCTGAAGATAAAGCCAGAGATTCTAACTCTTCATTTCAGCCTCCACAAAGTTCCCAGCAACAGTACCAGGATTTGACATCAGAATCTGGAACTTGTGATCCCTTATGCTCAGTTGATGAAACAAGTTCGCAAGATTTCGAAGACAATTATCAGCCCAAGACTGATTTGCTCAAAGCAGTTGCGATATTTGCAGCGGCGGCAACTGGGACTGTAGCAATTAACCACTCTTGGGTGGCTGCTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATTATATTTGAAGAGTCTCTAGCTTTCAACAAAAGTGGAGTAGGGCTATTGATGGCTGTAAGCTTATGGGTGATACGTAGCATTGGGGCTCCATCAACTGAAATAGCTGTTTCGGAGCTATCACACGCTTCTGCTGAAGTCAGTGAAATAGTGTTCTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAGATAGTTACCGACAATATAAAAACCCGAAACCCGCGCCTTCTCCTTTGGGTGATTGGATTTATTACATTTTTTCTCAGTTCAGTTCTGGACAACCTTACATCCACCATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCCGCAAACGCGGGCGGTGCATGGACTCCTATCGGCGATGTTACCACTACTATGCTGTGGATACATGGTCAGATAACTACAGTGGAAACAATGAAGGGTTTGTTTTTGCCTTCAGCCATTTCGCTAGCTGTTCCACTGGCCCTAATGTCATTAACAAGTGAAGCTAACGAGAAGGGGCCGGAATCTCCCAATGTTCTGTCATCTGAACAGATGGCTCCTCGAGGAAAGCTTGTTTTCTCGGTGGGTTTAGGCGCTTTGATTTTTGTCCCCGTGTTCAAGGCCGTCACAGGTTTGCCTCCCTACATGGGGATACTGCTTGGACTCGGCGTGCTTTGGATCCTTACCGACGCTATTCATTATGGTGAATCTGAAAAGAGACAGAAGCTTAAAGTCCCACAGGCTCTATCAAGGATAGACACTCAAGGAGCACTATTCTTCCTCGGAATTCTATTATCTGTTAGCAGTCTGGAGGCAGCAGGAGTTCTCCGGGAAATAGCGAATTACCTTGACGCTCATGTCCAAAATAGTGAACTAATTGCAAGTGCTATTGGAGTCATATCTGCAATCATAGACAATGTTCCACTGGTTGCTGCAACAATGGGAATGTACGACGTCACTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGGTTGCATTTTGTGCTGGTACCGGTGGTTCCATGTTAGTTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAAGTGGATTTCTTTTGGTACTTTAAAAAGGTTAGTGGATTTGCTTTTGCAGGCTATGCTGCCGGTATTGCTACGTATCTAGCCCTTCATAACCTCAACATCTCCATACCAACAACTCTCGCAGAGGTTCCTTTTCTCTCTGGTTCTTAA 1743 0.4435 MATFSIGTHLSMFQHSRNSRLSSIQSSPTQSKPFFATSSSCRTRFGVPNPKLLRNNVLARAEDKARDSNSSFQPPQSSQQQYQDLTSESGTCDPLCSVDETSSQDFEDNYQPKTDLLKAVAIFAAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTEIAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKIVTDNIKTRNPRLLLWVIGFITFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQITTVETMKGLFLPSAISLAVPLALMSLTSEANEKGPESPNVLSSEQMAPRGKLVFSVGLGALIFVPVFKAVTGLPPYMGILLGLGVLWILTDAIHYGESEKRQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLREIANYLDAHVQNSELIASAIGVISAIIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFKKVSGFAFAGYAAGIATYLALHNLNISIPTTLAEVPFLSGS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03809 580 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 54 580 IPR045016 GO:0006814|GO:0015297
Vivi1g03809 580 MobiDBLite consensus disorder prediction 68 91 - -
Vivi1g03809 580 NCBIfam sodium:proton antiporter NhaD 171 400 - -
Vivi1g03809 580 MobiDBLite consensus disorder prediction 63 91 - -
Vivi1g03809 580 Pfam Citrate transporter 155 511 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03809 Vivi-Chr1 81012924 81017278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03809 1 580 Antiporters AT3G19490 77.453 0.0 835