Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03797 ATGATGAAATTGAAACTTAACACCCTCTTGAGAGTTTCATCTTTTTTTGTTCTTCTACTTCTTCAATACTCAGTTGCTCTTAACTCTGATGGAATTTTCTTGCTGAAATTCAGATACTCCATCCTCAGTGACCCTTTATCAGTCTTTGAAAACTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGTAGTGAACTAGGATCTCCTAACACACCTGATTTCTTCAGAGTAACTAGCTTGATTCTTCCCAATAGCCAACTTCTTGGTTCCATTGCAGAAGAGTTAGGCTTTATTCAAAACCTTCATCACATTGATCTCTCAAACAATTTCCTTAATGGTTCATTACCAAACTCTATCTTCAACTCTTCTCAACTACAGTTCCTTTCACTCTCCAACAATGTCATCTCAGGTAAACTACCTGAGTTGGTTGGTTTATCAACAAACCTACAAATTCTCAACCTTTCTGAGAATGCCTTTGCTGGGTCAATCCCAGAAAACCTCACTTCTCTTCACAATCTAACCATTGTTTCTCTCAAAAGTAACTATTTTTCTGGTGAAATCCCAAATGGTTTCAACTCTGTTGTGATTCTAGATCTGTCCTCTAATCTACTCAACGGTTCTCTCCCAAGTAACTTCCAAGGCCAAAATCTCCAATACTTGAATCTCTCTTATAACAAACTCTCAGGAGCAATTCCACAAACATTTACAAGGCACATTCCGGAAAAATCTACAATTGATCTCTCATTCAACAACCTGACAGGACCAATACCTGAATCTTTGTTCAATCAAAAAACAGAATCACTCTCCGGAAACTCTGATCTATGTGGAAAACCTCTCAAGACTCTTTGTACTATTCCATCTACTAAGTCTACTGCACCGCATATCACAAACTCATCTTCACCAGCAATTGCTGCCATACCAATAACAATCGACTCAGGAAATAACACAAACACAACAACTACAACAACAACTAGTGGTGGTTCACAGAATGGTCTAAAACCTGCTACAATAGCAGCCATTGTTGTAGGTGACATAGCAGGCATGGGAGTTTTAGCTCTTATCATACTTTTTGTCTATCAACAAAGAAAGAAAAGATATCCAAAATCAACCAATGTTCTTCAAGAGAAGAATGCATCAGAAACTGTAGCGAAACAAGAGCAACAAGCTGTGAAAGCACACTTACTTCAATGCTCTTCTTGCTGTTTAACAGTTAAACAGCAAGAAGAAACATCAGAAGCAACCGCTTCTGATGACAGTGACCGTGAAATCCAGAACCTTCCGAAAGAAGGTACACTGGTAATGTTAGACGGCGAGACTAAGATGGATTTGGAAACATTATTGAAGGCTTCAGCTTATATACTTGGAACAAGCCGTGCCAGTATTGTGTATAAAGCAGTGTTGCAGGATGGAAGAGTTTTTGCTGTTAGAAGGATCGGAGAATGCGGTGTAGAAAGAATGAAAGAGTTCGAGAATCAAATCAGAGTTATCGCGAAGATTCGTCATCCTAATTTGGTTAGGATCCGTGGTTTCTGTTGGGGTGAAGATGAGAAGCTTGTTATCTCTGATTTTGTTCCTAATGGCAGCCTCTCTGCTATTGGTTACAGAAGAGGAGGTTTGTCGCCGATGAATTTATCTTTGGAATTGCGGTTGAAGATAGGGAAAGGGATGGCCAGAGGACTTGCTTACATTCATGAAAAGAAATATGTGCATGGAAATGTTAAACCAAGTAACATTTTATTGAATTCTGAAATGGAACCTATTATAAGTGATTTTGGACTTGATTTGCTTCTCTTGAATGATATCAACCATAGAGGAAACGATTCAGCTAGGCAATTAGTGAACCAGAAAACTCAACAACAACAAGAGTTTCTCATTGGTTCGACTCCGAGTCCGTATACGACAATGGGGTCATCATCGTCGACTAGTGGTGGTTGTGGTGGTGGTCAGGTACAACAATATCAAGCGCCAGAATCTTTCCAAAACATAAAACCAAACGCTAAAATGGATGTGTATTCATTTGGGGTTGTTTTGTTGGAGCTTTTTAGTGGGAGGGTTTTCTCGGACCGGGAATTGGACCAGTGGTCTGTTCTGTCCGGTTCGGTTGAAGAGGAGAAAAACCGGGTTTTGAGGTTGGTTGACGTGGCGATTAAACATGAGATCGAAGGTAGAGAAAATGTGGTGTTCACGTGTTTCAAGTTGGGGTTCAATTGTGTTTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAAGTACTACAAACTTTAGAGAAGATTTCCACCGTTGGTTTTAATTAA 2307 0.3975 MMKLKLNTLLRVSSFFVLLLLQYSVALNSDGIFLLKFRYSILSDPLSVFENWNYDDATPCSWHGVACSELGSPNTPDFFRVTSLILPNSQLLGSIAEELGFIQNLHHIDLSNNFLNGSLPNSIFNSSQLQFLSLSNNVISGKLPELVGLSTNLQILNLSENAFAGSIPENLTSLHNLTIVSLKSNYFSGEIPNGFNSVVILDLSSNLLNGSLPSNFQGQNLQYLNLSYNKLSGAIPQTFTRHIPEKSTIDLSFNNLTGPIPESLFNQKTESLSGNSDLCGKPLKTLCTIPSTKSTAPHITNSSSPAIAAIPITIDSGNNTNTTTTTTTSGGSQNGLKPATIAAIVVGDIAGMGVLALIILFVYQQRKKRYPKSTNVLQEKNASETVAKQEQQAVKAHLLQCSSCCLTVKQQEETSEATASDDSDREIQNLPKEGTLVMLDGETKMDLETLLKASAYILGTSRASIVYKAVLQDGRVFAVRRIGECGVERMKEFENQIRVIAKIRHPNLVRIRGFCWGEDEKLVISDFVPNGSLSAIGYRRGGLSPMNLSLELRLKIGKGMARGLAYIHEKKYVHGNVKPSNILLNSEMEPIISDFGLDLLLLNDINHRGNDSARQLVNQKTQQQQEFLIGSTPSPYTTMGSSSSTSGGCGGGQVQQYQAPESFQNIKPNAKMDVYSFGVVLLELFSGRVFSDRELDQWSVLSGSVEEEKNRVLRLVDVAIKHEIEGRENVVFTCFKLGFNCVSLVPQKRPSMKEVLQTLEKISTVGFN 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03797 768 FunFam Leucine-rich repeat receptor-like protein kinase 27 193 - -
Vivi1g03797 768 Gene3D Phosphorylase Kinase; domain 1 419 527 - -
Vivi1g03797 768 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515
Vivi1g03797 768 Pfam Leucine Rich Repeat 104 123 IPR001611 GO:0005515
Vivi1g03797 768 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Vivi1g03797 768 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
Vivi1g03797 768 SUPERFAMILY Protein kinase-like (PK-like) 457 762 IPR011009 -
Vivi1g03797 768 PANTHER OS05G0588300 PROTEIN 181 763 - -
Vivi1g03797 768 Pfam Protein kinase domain 458 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03797 768 ProSiteProfiles Protein kinase domain profile. 452 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03797 768 MobiDBLite consensus disorder prediction 630 654 - -
Vivi1g03797 768 Pfam Protein tyrosine and serine/threonine kinase 655 759 IPR001245 GO:0004672|GO:0006468
Vivi1g03797 768 Gene3D Transferase(Phosphotransferase) domain 1 528 765 - -
Vivi1g03797 768 Gene3D Ribonuclease Inhibitor 27 196 IPR032675 -
Vivi1g03797 768 SUPERFAMILY L domain-like 33 284 - -
Vivi1g03797 768 Gene3D Ribonuclease Inhibitor 197 289 IPR032675 -
Vivi1g03797 768 FunFam Leucine-rich repeat receptor-like protein kinase 197 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03797 Vivi-Chr1 80727249 80730213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03797 26 762 Receptor kinase-like Gene Family AT2G15300 48.961 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g03797 Pkinase 6.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03797 - - gmx:100820334 964.526