Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03793 ATGGCTACGTTTTCAATCGGAACACACTTGTCCATGTTCCAACATTCGAGGAATTCAAGGCTTTCTTCAATTCAATCTTCGCCCACACAATCCAAACCCTTCTTCACCACTTCTTCTTCTTGTAGAACCAGATTCGGACTTCCCAATCCCAAGTTACTCCGTAATAATGTATTGGCACGCGCTGAAGATAAAGCCCGAGATTCTAACTCTTCATTTCAGCCTCCACAAAGCTCCCAGCAACAGTACCAGGATTTGACATCAGAATCTGGAACTTGTGATCCCTTATGCTCAGTTGATGAAACAAGTTCGCAAGATTTCGAAGACAATTATCAGCCCAAGACTGATTTGCTCAAAGCAGTTGCGATATTTGCGGCGGCTGCAACTGGGACAGTAGCAATTAACCATTCTTGGGTGGCTGCTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATTATATTTGAAGAGTCTCTAGCTTTCAACAAAAGTGGAGTAGGGCTATTGATGGCTGTAAGCTTATGGGTGATACGTAGCATTGGGGCTCCATCAACTGAAATAGCTGTTTCGGAGCTATCACACGCGTCTGCTGAAGTCAGCGAAATAGTGTTCTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAGATAGTTACCGACAATATAAAAACTCGAAACCCGCGCCTTCTCCTTTGGGTGATTGGATTTATTACATTTTTTCTCAGTTCAGTTCTGGACAACCTTACATCCACCATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCCGCAAATGCGGGCGGTGCATGGACTCCTATCGGCGATGTTACCACTACTATGCTGTGGATACATGGTCAGATAACTACAGTGGAAACAATGAAGGGTTTGTTTTTGCCTTCAGCCATTTCTCTAGCTGTTCCACTGGCCCTAATGTCATTCACAAGTGAAGCTAACGAGAAGGGGCCGGAATCTCCCAATGTCCTGTCATCTGAACAGATGGCTCCTCGAGGAAAGCTTGTTTTCTCGGTGGGTTTAGGCGCTTTGATTTTTGTTCCCGTGTTCAAGGCCGTCACAGGTTTGCCTCCGTACATGGGGATACTGCTTGGACTCGGCGTGCTTTGGATCCTTACCGACGCTATTCACTATGGTGAATCTGAAAAGAGACAAAAGCTTAAAGTCCCACAGGCTCTATCAAGGATAGACACTCAAGGAGCGCTATTCTTCCTCGGAATTCTATTATCTGTTAGCAGTCTGGAGGCAGCAGGAGTTCTCCGGGAAATAGCGAATTACCTTGACGCTCATGTCCAAAATAGTGAACTAATTGCAAGTGCTATTGGAGTCATATCTGCAATCATAGACAATGTTCCACTGGTTGCTGCAACAATGGGAATGTACGACGTCACTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGGTTGCATTTTGTGCTGGTACCGGTGGTTCCATGTTAGTTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAAGTGGATTTCTTTTGGTACTTTAAAAAGGTTAGTGGATTTGCTTTTGCAGGCTATGCTGCCGGTATTGCTACGTATCTAGCCCTTCATAACCTCAACATCTCCATACCAACAACTCTAGCTGAGGTTCCTTTTCTCTCTGGTTCTTAA 1743 0.4441 MATFSIGTHLSMFQHSRNSRLSSIQSSPTQSKPFFTTSSSCRTRFGLPNPKLLRNNVLARAEDKARDSNSSFQPPQSSQQQYQDLTSESGTCDPLCSVDETSSQDFEDNYQPKTDLLKAVAIFAAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTEIAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKIVTDNIKTRNPRLLLWVIGFITFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQITTVETMKGLFLPSAISLAVPLALMSFTSEANEKGPESPNVLSSEQMAPRGKLVFSVGLGALIFVPVFKAVTGLPPYMGILLGLGVLWILTDAIHYGESEKRQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLREIANYLDAHVQNSELIASAIGVISAIIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFKKVSGFAFAGYAAGIATYLALHNLNISIPTTLAEVPFLSGS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03793 580 NCBIfam sodium:proton antiporter NhaD 171 400 - -
Vivi1g03793 580 MobiDBLite consensus disorder prediction 68 91 - -
Vivi1g03793 580 Pfam Citrate transporter 155 511 IPR004680 GO:0016020|GO:0055085
Vivi1g03793 580 MobiDBLite consensus disorder prediction 63 91 - -
Vivi1g03793 580 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 55 580 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03793 Vivi-Chr1 80688239 80692473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03793 1 580 Antiporters AT3G19490 77.108 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03793 - - gmx:100779521 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03793 1 80688239 80692473 Vivi1g03793 1 80688239 80692473 ECH