Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03767 ATGTGTGATATCTACAGGTTGTTGCAAATTCTGTCTACTGAGGAAGATGTGTATCTTGTTTATGATCATGTTGACCTAAATCTTGAAAGATACATCACCAATCACTTGCCTAGCATTGCCACTTTCGAAAGATGTGTTCTATATCAAGCTCTTTCGGGACTCACATACCTCCATTCTCACCACATTGTACACACCGATATCAATCCTTTTAATATTCTCGTTGAATGCCACCTAGATGATGAATCATTTCCTACAGTCAAGCTATGTGGTATTCCTGCACCCAAAACTTCTATTCATAAGGCTCGTCCTAACTATACAGCACCTGAACTTTTGATGGGCTCAACCAATTACTCGGCTGCAGCTGATGTCTGGTCTTTGGGCTACATATTTGCTCACATCATTAAGCGCCGACCTCTGTTCAATAATTTAGACGAGCATGGGGTATTGGCTGAGATATTCTGTTTGTTTGGCACGCCAACAGAAGAAACTTGGCCTAGAGTGTCTTCTATATGCAATTTTCTTCAAGAATTTAACCCTCCAATACAGCCAAAGGACCTGGCTAAAGAGTTCCCAAGCCTCGGACCTACTGGTCTTGATCTTCTTTCGTCGCTAATGGTTGCAAGTGCAATCGGTGTTTGTATACCACTACTTGGTAAAGTGATACCTGCTTTAAGTCCTGAGAAAGATATATTTTTTGTCATCAAAGCTTTTGCTGCTGGTGTGATATTATCAACCGGTTTCATTCATGTGCTTCCTGATGCTTTTGAAAATCTTACTTCACCTTGTTTGAAGGAACATCCATGGGGTGATTTTCCTTTTACCGGTTTTGTCGCTATGTGTACTGCTATGGGGACTCTTATGATTGATACATATGCCACTGCTTATTTTCAAAATCAGAATTCTAAAAAAACACCGACACAAGTCGAGAATCATGAGTCAACCCCAGATGTAGAGCATGAAGGACATGTGCATGTTCATACTCATGCTTCACATGGTCATGCACATGGCCATGCTTCTTCGGAGACATCATCAGAACTTCTTCGTCATAGGGTTGTATCACAGGTATTGGAGTTGGGGATTATTGTTCACTCGGTTATAATAGGAATTTCTCTTGGTGCTTCTGATGAGAGTTCTAAAACCATAAAGCCATTAGTAGCTGCGTTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGCTGTATAACTCAGGCAAATTTCAAGAGTCTATCTATTACGATCATGGGATTGTTCTTTGCTTTGACAACTCCGGTAGGGATTGGAATTGGCTTAGGGATTAGTAGTGTTTACGATGAGAACAGTCCAACAGCCCTCATTGTTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATCTTAATCTATATGGCACTTGTAGATCTTCTTGCTGCTGATTTTTTCATTATTCGTATTTGGGATTCTGAGGTCGGCCCTGATTTCCTATAA 1467 0.4083 MCDIYRLLQILSTEEDVYLVYDHVDLNLERYITNHLPSIATFERCVLYQALSGLTYLHSHHIVHTDINPFNILVECHLDDESFPTVKLCGIPAPKTSIHKARPNYTAPELLMGSTNYSAAADVWSLGYIFAHIIKRRPLFNNLDEHGVLAEIFCLFGTPTEETWPRVSSICNFLQEFNPPIQPKDLAKEFPSLGPTGLDLLSSLMVASAIGVCIPLLGKVIPALSPEKDIFFVIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMIDTYATAYFQNQNSKKTPTQVENHESTPDVEHEGHVHVHTHASHGHAHGHASSETSSELLRHRVVSQVLELGIIVHSVIIGISLGASDESSKTIKPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGLGISSVYDENSPTALIVEGIFNAASAGILIYMALVDLLAADFFIIRIWDSEVGPDFL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03767 488 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03767 488 Gene3D Phosphorylase Kinase; domain 1 11 23 - -
Vivi1g03767 488 NCBIfam ZIP zinc/iron transport family 202 478 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vivi1g03767 488 SUPERFAMILY Protein kinase-like (PK-like) 4 206 IPR011009 -
Vivi1g03767 488 SMART serkin_6 4 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03767 488 Pfam ZIP Zinc transporter 201 473 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi1g03767 488 Pfam Protein kinase domain 3 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03767 488 PANTHER ZINC/IRON TRANSPORTER 203 474 - -
Vivi1g03767 488 Gene3D Transferase(Phosphotransferase) domain 1 24 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03767 Vivi-Chr1 80312337 80314927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03767 204 478 Inorganic Solute Cotransporters AT3G12750 62.094 3.32e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi1g03767 Zip 6.2e-67 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03767 K14709 - gmx:547695 390.963