Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03739 ATGTCTAAATATAATGAATCAACTTTGCATCTCGATAGTGACAGTGAAGAGGTGGAATTCACTAGTGTTAATGGTGATGGTAGTGATAGATATACGTTGGACAAAGAGGATTGTAATGGTCATAAATGTTTAAGTGAAGTTACAAATGAAGATATAAGAGCTATGGAATTTAGCACAAAGGAAGAAGCGATACAATTTTACATAACATATGCTCATTTCCATGGATTTGCGGTAAGGAAAGATGATGTTGTACGTGATCATGAAAGGAAAATTGTTGTCCGTCAATTACTTTGCAATAAAGAAGGAAAGAGTGAAAGAAAAAATAAGAAGAATGAGGATAAATATCGACCAACTATGCGACCTGGCTGTCTTTCTAGATTTCGAGTAGCCTATGATTATGTTCGTAAGCTTTAG 414 0.3454 MSKYNESTLHLDSDSEEVEFTSVNGDGSDRYTLDKEDCNGHKCLSEVTNEDIRAMEFSTKEEAIQFYITYAHFHGFAVRKDDVVRDHERKIVVRQLLCNKEGKSERKNKKNEDKYRPTMRPGCLSRFRVAYDYVRKL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03739 137 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 130 - -
Vivi1g03739 137 Pfam FAR1 DNA-binding domain 65 131 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03739 Vivi-Chr1 79802214 79802627 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g03739 FAR1 1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03739 - - vvo:131647079 285.034