Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03677 ATGAGATCAATTCCCATCTCTCTCTCCCTCTCTGAAACAATCACAAGAAAACTTCATATATTAGATGAGATTTCAATGGAGAAAGTTTGTGAATTCTGCACAGCATTGAGGCCACTTGTTTACTGTACTGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAAGTCCATTGGGCGAACGAATTGTCCGGCCGCCACCCCCGGACCCTCGTGTGTAACTCGTGCAAATGTCATCTTGCTTATGTTCAGTGCTTGGATCATAAAATGTTAGTCTGTCGAGACTGTGATCGAAATCTGCATGATAGTTCTTCATCGCATTGCAGACGAGCTGTCAAAACATTCATCGGCTGCCCTTCTGCCAAAGAGTTTGCAACACTCTGGGGATTTGAATTTAAGGAGATCGAAAAATGTGTCAATCAGAATGATCAGTTTACATCCGATAACGGGTCTAGCAGTCGACTAGGCCAGATAATGTTCGATGATCAAGAGCGGAAAACGATTCTGCAGCAGATCGCTGGCTTAAAACGGTTTCAGCTAAATGAGGAGAATGATCATTCTACAAAGATAAATGGTCTACACGTGGATGAAAAGTTCAATCAGCAAGCACAAAAATCGCAGGATTTTGCTATTAATCTTCTCGAGGAAGACAATCCTATCGGAGAGTTATGGTCCCAAAACATTCAAGACCTGGGAATATGCGAAGAATTTGCTTGTCAAGATGATTTTAACATGCCCGACGTTGACTTAACATTCCAAAACTATGAAGAACTATTCGAAGGAGATCAAGATCCAATTAGAGTCATGTTTGGTGGCAAAGATCTCTCATGTTCTTCTTTAGAGAAAGATTTATCCGTTGATGAGTAA 867 0.4129 MRSIPISLSLSETITRKLHILDEISMEKVCEFCTALRPLVYCTADAAYLCLSCDAKVHWANELSGRHPRTLVCNSCKCHLAYVQCLDHKMLVCRDCDRNLHDSSSSHCRRAVKTFIGCPSAKEFATLWGFEFKEIEKCVNQNDQFTSDNGSSSRLGQIMFDDQERKTILQQIAGLKRFQLNEENDHSTKINGLHVDEKFNQQAQKSQDFAINLLEEDNPIGELWSQNIQDLGICEEFACQDDFNMPDVDLTFQNYEELFEGDQDPIRVMFGGKDLSCSSLEKDLSVDE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03677 288 ProSiteProfiles Zinc finger B-box type profile. 68 112 IPR000315 GO:0008270
Vivi1g03677 288 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 263 - -
Vivi1g03677 288 SMART bboxneu5 25 72 IPR000315 GO:0008270
Vivi1g03677 288 SMART bboxneu5 73 112 IPR000315 GO:0008270
Vivi1g03677 288 CDD Bbox1_BBX-like 29 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03677 Vivi-Chr1 78735137 78739362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03677 25 266 C2C2-CO-like Transcription Factor Family AT1G68190 40.520 2.19e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03677 - - vvo:131643117 580.096