Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03644 ATGAGTCTAGTTTATGAATTTATGTTCCTATTGTTTTCACACCTCGTGCCGCGTCTTGTGTTGGCGGGTGGATATGAGTACCAAGGAGAGTGTCCAGGTTCATTTAGTTGTGGATATCTAGGCAATATCAGCTTCCCTTTCACTACAACTCAACGCCAAGACTGTGGCTTATTGCCTATCCATTATTGTCATGATGTTTCAATGAAGCCCAAAATGATCCAGTTTCAGAATAAAGGGAAACAACAGTGTGAGTTTGAGGTTGAAGTTGTAAGTCCTACTGAGTATAACGGAGGTCATGCTACTTCTAATTGTGTTTTTAGAGACAAGAGTCTGCGCAAACTGCTGCAAAACCGAAGTTGTGAAGCTCTCAGATATAATTACACTCTTCCTCTCACTCCTCACTTTGCTTTTCATTTGGAAACTTACACAAGCTTGTTCATGTGCAACCGTACCCTCCATGTAAATCCTCCAAAATATATGCATAAGTATACAAACTGCCCCCTTTATGATGTCTACTACCAGCCTCACATCTATACTGATAAAGAGTCTTGGAGGGCTTTTACAGCATGTGCAAATGTCCGACTTCCGATTAAAGACCTCGCTGACTCTGACGACCCTTTTACTTTTGTAACTGCTGATTTCCCAATTCAAGTAAACATAACAGAGGAATGTGCATATTGTCACTATAAACAAAGAGGACAGTGTCAACTTGACAGCTACGGGAGGTTTTTTTGTGCCAATGCTATGCGAAAGGGGCTGAGGCGGAATGTTAAACTGGGTATAGGTTTGGTTATTGGAATCCTGGGCATCTTGTTCATCGGGTTCATGTTTCTCCTTCTACTCTACAAACGAAAACATGCTATCTCGGTTGGACACTTCCAATCTAGTAACTCTTATTCTGATGCATCCATAAATCGACGCAGAGAAATTGGTAGTAAACACTTCGGAGTTCCATTATTCTCCTACGATGAGCTTAGAAAAGCAACAAACAATTTCGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTTAGGGAAACTTCCCGATGGACGTGAAGTTGCTGTCAAACGTTTATACGAACACAACTATAGAAGAGTAGAACAGTTTATGAATGAAGTTAATATCCTGACAACATTGCGACATAAAAATCTCGTGTCCCTCTATGGCTGCACATCACGGCACAGCCGGGAACTACTGCTTGTGTACGAATATATCTCAAATGGCACCATCGCAAGTCATCTCCATGGTGAATTGGCCAAGCCAAATTTACTACCATGGTCGATCCGAATAAAAATTGCCATAGAGACTGCTACTGCCTTGACTTATCTCCATGCTTCTGGTATCATCCACCGTGATGTGAAAACCAGTAACATACTCCTTGATGACAATTTTCGTGTTAAAGTTGCAGATTTCGGTCTTTCAAGATTATTCCCTGAGGATGCCACTCATGTTTCCACAGCTCCACAAGGGACACCGGGTTACCTTGATCCTGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGTGATGTATATAGTTTCGGAGTCGTGCTCATTGAGCTGATATCATCTAAGCCCGCTGTTGATATTAACAGAAGTAGGGAAGAGATTAACTTGTCAACTCTAGCAACAAAAAAGATTCAAGAAAGTGCAATTGATGAGCTGGTAGATCCTAGTCTTGGCTTTCATTTAGACAATGAGGTTAATAGCATGATAGTTTCAGTGGCAGAATTGGCATTTCAATGCTTGCAAAGGGACAAGGAGATGAGACCTTCTATGGAAGAAGTGTTAGATGAACTTAGGAGAATAGAGAGTGGGAAGGATGTGGTTGAGGTTGTAGAGGAAGCAGATGTAGATGGTGTTGGATCTTCACACAGTAATGTAAATCCACCACCAACCTCACCTGAATGGGATGAAGTTGGATTATTGAAGAATATGAAAAATATGAAGCACCCGTCTTCACCAAACACGGTCACTGATAAATGGGAAAGTATTAGTACTACACCTAATGCCAGTGCTTAA 2034 0.413 MSLVYEFMFLLFSHLVPRLVLAGGYEYQGECPGSFSCGYLGNISFPFTTTQRQDCGLLPIHYCHDVSMKPKMIQFQNKGKQQCEFEVEVVSPTEYNGGHATSNCVFRDKSLRKLLQNRSCEALRYNYTLPLTPHFAFHLETYTSLFMCNRTLHVNPPKYMHKYTNCPLYDVYYQPHIYTDKESWRAFTACANVRLPIKDLADSDDPFTFVTADFPIQVNITEECAYCHYKQRGQCQLDSYGRFFCANAMRKGLRRNVKLGIGLVIGILGILFIGFMFLLLLYKRKHAISVGHFQSSNSYSDASINRRREIGSKHFGVPLFSYDELRKATNNFDHTKELGDGGFGTVYLGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIASHLHGELAKPNLLPWSIRIKIAIETATALTYLHASGIIHRDVKTSNILLDDNFRVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSTLATKKIQESAIDELVDPSLGFHLDNEVNSMIVSVAELAFQCLQRDKEMRPSMEEVLDELRRIESGKDVVEVVEEADVDGVGSSHSNVNPPPTSPEWDEVGLLKNMKNMKHPSSPNTVTDKWESISTTPNASA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03644 677 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Vivi1g03644 677 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 671 IPR044652 GO:0004672
Vivi1g03644 677 MobiDBLite consensus disorder prediction 653 677 - -
Vivi1g03644 677 Gene3D Phosphorylase Kinase; domain 1 303 408 - -
Vivi1g03644 677 MobiDBLite consensus disorder prediction 624 643 - -
Vivi1g03644 677 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03644 677 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 304 408 - -
Vivi1g03644 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Vivi1g03644 677 Gene3D Transferase(Phosphotransferase) domain 1 409 620 - -
Vivi1g03644 677 SMART serkin_6 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03644 677 MobiDBLite consensus disorder prediction 651 677 - -
Vivi1g03644 677 FunFam Wall-associated receptor kinase-like 20 409 616 - -
Vivi1g03644 677 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Vivi1g03644 677 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03644 Vivi-Chr1 78175014 78179990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03644 35 677 Receptor kinase-like Gene Family AT1G25390 45.679 3.30e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1g03644 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03644 - - ahf:112712053 778.089