Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03639 ATGACCTCCCTTTTCATTTTCAAATCATTAATATTCTTCCAGTTTCTACTTGTTTCAGCTCAAGATCATGAAACATGTCCAACTGCTTTTAGTTGTGGATATCTTGGCCAGATCACTTTTCCTTTCACAGTCCCACAACGCCCTCACTGTGGCGCTTTGGCCATACATAACTGTGAGAATGCAACTGCTCCCAAAACCATCCAACTAGGCAGTCCACCATCAAAACAGTTTTTTACTGTTCCATACGTGGAAGGTGATACCATCACAGTCAGGGAAAATGAAGCTCAACGGAAGACTTTGCGATCCAAAAATTGTCAAGCCATTCGCAATTTTCCTGTTCCTCCCACTTCTCCTTTAGCTTCTTTCTACATCAAATATAATATAACTATGTTCAAATGCAATCACTCCCTTAGTGTAATCCCTCCCAAATCATTTCAAAACTACAAAAACTGTTCCGGTTATAATATCTACTATTATTACCTTCAAAACTCTAGTGGTAATTTCACAGTGCCAAGTTCTTTGGCACGGTGTAAAGTGTATCAGGTTGCAATAAGAGACAGCCCTTCTGATGACCTCTTTGATTTTCTATCTGCTGAAATCCAAATTAAAGTACAATTGTCTGATGATTGCAACAAGTGTCTTCGCCACCAAGGAGGCCGATGTCAACTTGACATTCACAAAAATTTCTATTGTGTCAAAGAGGATAAAAGATTGGCTTGGAAGTTAGGAATTGGCATTGGACTCCCTGTCGTTATTATAACTGGATTGCTGATTACATGGCGCTGTAAACGACGTGTTCCTAATTTCAACAACAAATACACAGAGAGTGACAGTTTCTACAATGGGGTGCCAGTGTTTTCCTTTAAGGATCTTGAAGTAGCAACAAAAAAATTTGACAGTTCAAGAGAACTCGGAGAAGGAGGATTTGGGACTGTTTATTATGGAAAACTAAAAGATGGACGTGAAGTTGCTGTGAAGCGCCTTTATCAGCACAACGTCAAACGAGTTGAACAGTTCATGAATGAAATCAAAATCCTCACTCGCTTGCGCCACAAAAATCTAGTCACTCTTTATGGCTGCACTTCGCATCATAGTCATGAACTACTGCTTGTATACGAATACATTTCAAATGGAACTGTCGCCAGTCATCTGCGTGGTGAATCTGGATTTTTGCCATGGCATATTCGAATGAAAGTTGCCTTAGGGACTGCTAGTGCTTTGGCTTATCTCCATGCTTCTGAAATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTGACGATACCTTTTGCATTAAAGTAGCAGATTTTGGACTGTCAAAACTGTTCCCAAATGATGTCACACATGTCTCCACGGCTCCGCAAGGAACCCCAGGCTATGTGGATCCGGAATATCATCAGTGCTACAGGCTTACAAGCAAGAGTGATGTTTACAGTTTTGGGGTTGTGCTTGTTGAGCTGATATCATCTATGCCTGCAGTTGATATGAGTAGAGATAAGGAAGAGATAAACTTAGCAAATCTAGCCATAAGGAAGATTCAAAAAAGTGCAATCAGTGAACTCGTGGATCCTACCCTTGGTTTTGAGTCAGATAGTGATGTTAAAAGAAAAATAGTTTCAATAGCAGAACTGGCTTTTCAGTGTTTGCAACGGGATAAGGAATTGAGGCCTTCCATGGATGACGTTTTAGAGGTGCTGAGGAGAATTGATAATGGGAGTGGGGTGGATAAGTTTGGACATGTAGAGGAAGTAATAGCTCATGGAGCAGGTATATCACGTATCAATGTTCGTTCACTGTCACCACCTTCATCCGACCATGTTGAGGTGAAATTGTCGAAGGATAAAAAGATAACGCCTTCTCCTAAGGGTGTGACAGATAAATGGGATAGTGAATCCACTACTCCTAATATAAGTGGCCAATCAGCAAGCCAAATGCAATAA 1944 0.4064 MTSLFIFKSLIFFQFLLVSAQDHETCPTAFSCGYLGQITFPFTVPQRPHCGALAIHNCENATAPKTIQLGSPPSKQFFTVPYVEGDTITVRENEAQRKTLRSKNCQAIRNFPVPPTSPLASFYIKYNITMFKCNHSLSVIPPKSFQNYKNCSGYNIYYYYLQNSSGNFTVPSSLARCKVYQVAIRDSPSDDLFDFLSAEIQIKVQLSDDCNKCLRHQGGRCQLDIHKNFYCVKEDKRLAWKLGIGIGLPVVIITGLLITWRCKRRVPNFNNKYTESDSFYNGVPVFSFKDLEVATKKFDSSRELGEGGFGTVYYGKLKDGREVAVKRLYQHNVKRVEQFMNEIKILTRLRHKNLVTLYGCTSHHSHELLLVYEYISNGTVASHLRGESGFLPWHIRMKVALGTASALAYLHASEIIHRDVKTNNILLDDTFCIKVADFGLSKLFPNDVTHVSTAPQGTPGYVDPEYHQCYRLTSKSDVYSFGVVLVELISSMPAVDMSRDKEEINLANLAIRKIQKSAISELVDPTLGFESDSDVKRKIVSIAELAFQCLQRDKELRPSMDDVLEVLRRIDNGSGVDKFGHVEEVIAHGAGISRINVRSLSPPSSDHVEVKLSKDKKITPSPKGVTDKWDSESTTPNISGQSASQMQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03639 647 Gene3D Phosphorylase Kinase; domain 1 270 374 - -
Vivi1g03639 647 SUPERFAMILY Protein kinase-like (PK-like) 272 570 IPR011009 -
Vivi1g03639 647 Pfam Protein kinase domain 299 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03639 647 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Vivi1g03639 647 MobiDBLite consensus disorder prediction 626 647 - -
Vivi1g03639 647 MobiDBLite consensus disorder prediction 608 623 - -
Vivi1g03639 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Vivi1g03639 647 ProSiteProfiles Protein kinase domain profile. 298 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03639 647 Gene3D Transferase(Phosphotransferase) domain 1 375 584 - -
Vivi1g03639 647 SMART serkin_6 298 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03639 647 FunFam receptor-like protein kinase FERONIA 263 374 - -
Vivi1g03639 647 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 634 IPR044652 GO:0004672
Vivi1g03639 647 MobiDBLite consensus disorder prediction 597 647 - -
Vivi1g03639 647 FunFam Wall-associated receptor kinase-like 20 375 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03639 Vivi-Chr1 78147302 78149941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03639 30 640 Receptor kinase-like Gene Family AT1G25390 46.288 6.09e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1g03639 Pkinase 8.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03639 - - aprc:113871893 748.814