Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03638 ATGAAACAAATTGTGAAACATAATTCGATGTCTTTCGTTTATGCAGTAGTACATCATAGTTTCCTTTTGTTCTCTCATTCAACTCTACTACTGTTAATTATCTCAACTAACAAAGGAAATGGACACAGTGATGATTGTCCAGACTCATTTGATTGTGGAAATCTTGGATTTCTTCGCTCCCCTTTTACGAAGTTTGGATTCCCAAACTGTGGTGCATTGGCAATTCATGGTTGCGATGATGTTAACCAAACTTCTATGAAGCATGTACAGTTAACCAAAGGAGGAAAACTCTTTCAAGTTACAAACATTGCTTATGACTCATCCAAGGGAAACACTATTTCCATTATTGACCAGAATTTCAACCACCTTTTGATGAAAAGTGCTTGTGAAGTCTTCACCTATGTTAATATTATCCTCCCTTCACCTTCTCCTTTTGGAACGTTTTATATGAAAGACAACATAACTGCTTTCAAATGCAACCGTACCCAAAAATTAGTCACCAATCCTCCAAATAATTTCTTCAAGAACAGCTCTTGTCCAAAATATGATTTTTATTTCGGTGACTCAATATCCGATGGTGAGTCCAATCGCTCTTTCTCGACGTGTTTTTTGCTTTATCTTCCTATCGTTGAGTTAGGCTTTGCACTTTCTGGAAATCCATTTCCATTCTTAGTTCATGAAATTACCTTTAAATTTCAACCTTCCGATGAGTGTGAACGGTGTCACCATGATGCAAAAGGTCATTGTTATGCTCGCAACAACAGACAAATTTATTGTGCAAGGAAACATAGAAGTCCTCCATCTTGGAAGCTTCCATTGGTTTTAGGAGTCGGTGTAGGACCATGGATCATAGTTGGATTGTTCCTCACGCTACGGTATTTCAAACGGAAATATGACTCTGCATGCATCCAACTCCAACCAAGTAACAACGCTTTTGTTGATCCTCATCCAAATCGTGAATCAGAGTCAAACAAGCTCTTCTTTGGTATACCTGTCTTCTCTTATGAAGAGCTTCAACAAGCAACAAACAATTTCGACAGCACTAGAACGCTAGGAGATGGAGGTTTTGGCACTGTGTACTACGGGAAACTCAAAGATGGAAGGGAGGTAGCTGTGAAAAGATTATTTGAGCACAATTACAGGAGAGTAGATCAGTTTGTGAATGAAATTGAATTACTCGCTCGCTTGCGCCATAGGAACCTGGTGTCCCTCTATGGCTGCACTTCGCGTCACAGTCGCGAGCTACTCCTTGTATATGAATACATTCCAAATGGAACCGTTGCTAGCCATCTCCATGGTGATTTAGCTAAGACCGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCAATAGAAACTGCTTCTGCGTTGGCTTATCTACACGCTTCTGACATCATTCATCGAGATGTCAAAACCAACAACATTCTACTTGACACTAACTTTTCTGTTAAGCTAGCAGATTTTGGACTGTCGAGGTTGTTCCCGAACAATGTCAGCCATGTTTCCACTGCTCCACAAGGAAGTCCGGGTTACCTTGACCCTGAATATCTCCAACTCTACAAGCTCTCAGTGAAGAGTGATGTGTATAGTTTTGGTGTAGTGCTCATCGAGCTAATATCGAATATGACAGCAATTGATTCTGCTAGAGAAAAAGAGGAAATAAACTTGGCGAATCTAGCGGCTAAAAAGATAAGAAAAGGTGCAATTGGGGAGCTGGTTGATCCATCACTTGGGTTTGAATCAGATAGTGAAGTTAAAAGGATGGTATCTTCAGTGGCTGAATTGGCTTTTCAGTGTGTGCTAGGAAACATGGAGTTGAGACCTTCCATGGATCAAGTTCTGCAAGAACTCAAGAAAATTGATGGTGGGAATTTTGAGTTTGTTCATCTAGAGAAAATGCGTGATTTTGTCGAGTCCTCGCGCTCGGAAGAAATACACCCATCATTAAATGAAACTTCTTTGAATAAAAAGCAAGTATCTTCTTCACCAAAGTCATTGACTGAGAAATGGGAAAGTGAATCTACTACTCCCCATGCCAGTGGTTAA 2046 0.4018 MKQIVKHNSMSFVYAVVHHSFLLFSHSTLLLLIISTNKGNGHSDDCPDSFDCGNLGFLRSPFTKFGFPNCGALAIHGCDDVNQTSMKHVQLTKGGKLFQVTNIAYDSSKGNTISIIDQNFNHLLMKSACEVFTYVNIILPSPSPFGTFYMKDNITAFKCNRTQKLVTNPPNNFFKNSSCPKYDFYFGDSISDGESNRSFSTCFLLYLPIVELGFALSGNPFPFLVHEITFKFQPSDECERCHHDAKGHCYARNNRQIYCARKHRSPPSWKLPLVLGVGVGPWIIVGLFLTLRYFKRKYDSACIQLQPSNNAFVDPHPNRESESNKLFFGIPVFSYEELQQATNNFDSTRTLGDGGFGTVYYGKLKDGREVAVKRLFEHNYRRVDQFVNEIELLARLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGDLAKTGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDTNFSVKLADFGLSRLFPNNVSHVSTAPQGSPGYLDPEYLQLYKLSVKSDVYSFGVVLIELISNMTAIDSAREKEEINLANLAAKKIRKGAIGELVDPSLGFESDSEVKRMVSSVAELAFQCVLGNMELRPSMDQVLQELKKIDGGNFEFVHLEKMRDFVESSRSEEIHPSLNETSLNKKQVSSSPKSLTEKWESESTTPHASG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03638 681 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 317 421 - -
Vivi1g03638 681 ProSiteProfiles Protein kinase domain profile. 345 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03638 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Vivi1g03638 681 Pfam Protein kinase domain 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03638 681 SMART serkin_6 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03638 681 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Vivi1g03638 681 SUPERFAMILY Protein kinase-like (PK-like) 327 621 IPR011009 -
Vivi1g03638 681 FunFam Wall-associated receptor kinase-like 20 422 629 - -
Vivi1g03638 681 MobiDBLite consensus disorder prediction 641 681 - -
Vivi1g03638 681 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Vivi1g03638 681 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Vivi1g03638 681 MobiDBLite consensus disorder prediction 646 681 - -
Vivi1g03638 681 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 674 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03638 Vivi-Chr1 78124743 78127677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03638 46 681 Receptor kinase-like Gene Family AT1G25390 44.870 2.26e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1g03638 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03638 - - gmx:100778085 780.785