Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03635 ATGTTCAAGTCAACCAACTATAGCATATTATATCATACTTGGCTTATATTATCAATTTTTTTAGCTCATAAACGTATTGGTTGGTTATTCATGATGGCCTTAGTTTACAAAATTTTGTTCCTTTTGTTTTCTCACCTCATGCCACTTGGTAACGGGTACCAAAATAATTGTCCAGCTTCATTTAGTTGTGGATTCCTAGGCAATATCAGTTTCCCTTTCACTACAGCACAACGCCAGGATTGTGGCTTATTGCCAATACATAGTTGTGATGATGCTCCAGGGAAGCCCAAAACGATCCAATTTCAGAATAAAGGGAAACAGTTTGATTTTGAGGTGGAAAAGGTAAGTCCTCTTGAGCATCATGGTAGTAATGCAACTTGTAGTTGCGTTTTCAGAGACGATAATCTCTACCAACTTCTACAAAGCAAAAATTGCGAAGCTTTCAGATATAACTATACTCTTCCTCCAACCTCTCACTTTGTTTCTTTACATATAGAAACTCATGCAACCTTGTTCATGTGCAACCGTACCCTCCATATAAACTCTCCGAAATATATGCATAAGTATACAAGCTGCCCTCTCTATGATTTCTACTATCAGCCTGTTAATAGCGCTCAGAATGTATCTCGGAGTGCTTTTACAGCTTGTACAAACGCCCTGCTTCCGGCTAAAGACGTTGCAGACTCTGGCAACCCTTTTAATTTCATAACTTCTGACATTATAATTCAAGTAAAGGTAACAGAGGAATGTGCAAGTTGTCACTACAACCAAAGAGGACGGTGTCAACTTGACAGCAACGGAAGGTTTTATTGTGCCAACCATATTCAAGCAAACACCCCGAAAAAAGCTACGGTTGCAAAGCGAAAAGGGCTGAGACGAAATGTTAAACTTGGTATAGCAATCATGGTGACCATTGGAGTTGCAGTGCTGATGTTGTTGGCTTATTGTTTAAGGACAAAAATCTTCCCTCCAACATTTCTTTTGTTCAGGAAGAAAAATTCAACCCATCGTATCATTGAGGACTATTTGAAAGAACATGGATCCCTTCCTGCTGCTGCCAGGTACAATTATTCAGATATAAAAAAAATAACAAACTCTTTCGAAAACAAATTAGGCCAAGGAGGGTATGGGAGTGTATACAAAGGGAAGTTACATGATGAGCGTCCTGTTGCAGTAAAGATTTTAAGTGATTCAAAAGGTGATGGTGAAGATTTTTTAAATGAAATTGCGAGTATAAGTAGAACTTCGCATGTCAACGTTGTTAGACTTTTGGTGTTCTGTTTGGAGGGTTCTAAAAAAGCACTAATATATGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAAATCCACTGCGGAACGATCTCCAATTGGATTGCAAAACATTGTATGAGATTGCAATTGGCATTGCTCATGGATTAGAGTACTTGCACAGAGGCTGCAACACTAGAATATTACATTTTGACATAAAGCCTCATAATATACTACTAGATGCTGATTTTTGTCCAAAAATTTCTGATTTTGGACTTGCCAAAATATGTCCAAGAAAAGAAAGCATTATATCCATATCCGGCGCGAGAGGAACACCTGGATATATTGCCCCTGAGTTGATTTTCAGAAATTTTGGAGGCACCTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTTTTAGAGATGGTTGGACAAAGAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGTGAGTTATACTTTCCACACTGGATTTACAAGCGTCTTGAATTGAATCAAGATCTTGGACTTAGGTGTATTAACAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCAGTCCTTCGAATCGACCATCTATGCATAAAGTGGTGGAAATGTTGGAAGGGAACCTTCAAGTGTTGGAAATGCCACCCAAACCATTTTTGTTTTCTCCTTCAGTTTCTTCAACCAATCTGACTGAAATATTATAA 2010 0.3771 MFKSTNYSILYHTWLILSIFLAHKRIGWLFMMALVYKILFLLFSHLMPLGNGYQNNCPASFSCGFLGNISFPFTTAQRQDCGLLPIHSCDDAPGKPKTIQFQNKGKQFDFEVEKVSPLEHHGSNATCSCVFRDDNLYQLLQSKNCEAFRYNYTLPPTSHFVSLHIETHATLFMCNRTLHINSPKYMHKYTSCPLYDFYYQPVNSAQNVSRSAFTACTNALLPAKDVADSGNPFNFITSDIIIQVKVTEECASCHYNQRGRCQLDSNGRFYCANHIQANTPKKATVAKRKGLRRNVKLGIAIMVTIGVAVLMLLAYCLRTKIFPPTFLLFRKKNSTHRIIEDYLKEHGSLPAAARYNYSDIKKITNSFENKLGQGGYGSVYKGKLHDERPVAVKILSDSKGDGEDFLNEIASISRTSHVNVVRLLVFCLEGSKKALIYEFMPNGSLEKFIYEEKNPLRNDLQLDCKTLYEIAIGIAHGLEYLHRGCNTRILHFDIKPHNILLDADFCPKISDFGLAKICPRKESIISISGARGTPGYIAPELIFRNFGGTSHKSDVYSYGMMVLEMVGQRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCINNEIDEEMVRKMTVVSLWCIQTSPSNRPSMHKVVEMLEGNLQVLEMPPKPFLFSPSVSSTNLTEIL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03635 669 FunFam serine/threonine-protein kinase PBS1-like 334 439 - -
Vivi1g03635 669 SUPERFAMILY Protein kinase-like (PK-like) 350 641 IPR011009 -
Vivi1g03635 669 PANTHER RUST RESISTANCE KINASE LR10-RELATED 336 659 IPR045874 GO:0004672
Vivi1g03635 669 SMART serkin_6 365 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03635 669 Pfam Protein kinase domain 368 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03635 669 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Vivi1g03635 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Vivi1g03635 669 ProSiteProfiles Protein kinase domain profile. 365 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03635 669 Gene3D Phosphorylase Kinase; domain 1 339 439 - -
Vivi1g03635 669 FunFam PR5-like receptor kinase 440 652 - -
Vivi1g03635 669 Gene3D Transferase(Phosphotransferase) domain 1 440 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03635 Vivi-Chr1 78087917 78091399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03635 33 653 Receptor kinase-like Gene Family AT5G38260 39.752 6.01e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi1g03635 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03635 - - vvo:131610174 810.446