Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03633 ATGCTACTTTGTAATGGGTTCGAAAAAGATTGTCCGGCTTCATTTAGTTGTGGATACCTTGGCAATATTAGCTTCCCTTTCACTACAACGCAACGTCAGGATTGTGGCTTATTGCCAATACATAATTGTGATGATGCTCCAAGGAAGCCCAAAATGATCCAATTTCAGAATAAAGGGAAATGGTTTGAGGTTGGAATTGTAAATCCTCTTGAGTTTCATGCTGGTAATGCTACTTGTACTTGTGTTTTCAGAGACATGAATCTCTACAAACTGCTGCAAGACAAAAGTTGTGAAGCTTTCAGATATAGATATATTCTTCCTCCCACCTCTCACTTTGTTTCTTTGCATATAGATTCTCATGCAACCTTGTTCATGTGCAACCGTTCCCTGCATGTAAACCCTCCAACATATATGCACAACTATACAAACTGCCCTCTCTATGATTTCTACTACCAACCTTTCAAAATTACTGATAATGCATCTCTAAGTGCTTTTACAGCTTGTACAAAGGCCCAGCTTCCAGCTAAGGATTTTGCTGATGCTGACGACCCTTTTACTTTCGTAACAGCTGATATCACAACTCAAGTAAACATAAAAGAGGAATGTGCAAGTTGTCACTACAACCAAAGAGGACGGTGTCAACTTGACAGCAACGGAAGGTTTTATTGTGCCAATGGTAAAAAAGGGCTGAGGTGGAATGTTAAAATGGGTATAGCTATCATGGTGACTTTTGGAGTTACAGTGAAGGAAGATTCAACTCATCATATTATTGAGGAGTATATGAAAGAACATGGACCTCTTCCTGCTGCAGCTAGGTACAGTTATTCAGATATAAAAAAAATAACAAACTCTTTCAAAAACAAATTAGGCCAAGGAGGGTATGGAAGTGTTTACAAAGGGAAATTACATGATGAGCGTACTGTTGCAGTGAAGATTTTAAGTGAATTAAAAGGTGAAGGTGAAGATTTCATCAATGAAGTTGCGAGTATCAGTAGAACTTCACATGTCAATGTTGTTAGGCTTTTGGGGTTTTGTTTGGACGGTTCTAAAAAGGCGCTAATATATGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAAATCCACTGCAAGATGACCGGCAATTGGATTGCAAAACTTTGTTTCATATTGCAGTTGGTGTTGCTCGTGGATTAGAGTACTTACATAGAGGATGTAACACTAGAATTTTACATTTTGACATAAAGCCTCATAATATATTACTAGATGAGGATTTCTGTCCAAGAATTTCTGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAAAGTATTGTATCCATCTTTGGCGCAAGGGGAACACCTGGATATATTGCTCCAGAGTTGTTTTCAAGACATTTTGGCAGTGTGTCGCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTAGAGATGGTTGGACGAAGAAAGTGTGAATAA 1473 0.3788 MLLCNGFEKDCPASFSCGYLGNISFPFTTTQRQDCGLLPIHNCDDAPRKPKMIQFQNKGKWFEVGIVNPLEFHAGNATCTCVFRDMNLYKLLQDKSCEAFRYRYILPPTSHFVSLHIDSHATLFMCNRSLHVNPPTYMHNYTNCPLYDFYYQPFKITDNASLSAFTACTKAQLPAKDFADADDPFTFVTADITTQVNIKEECASCHYNQRGRCQLDSNGRFYCANGKKGLRWNVKMGIAIMVTFGVTVKEDSTHHIIEEYMKEHGPLPAAARYSYSDIKKITNSFKNKLGQGGYGSVYKGKLHDERTVAVKILSELKGEGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNPLQDDRQLDCKTLFHIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPRISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRHFGSVSHKSDVYSYGMMVLEMVGRRKCE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03633 490 ProSiteProfiles Protein kinase domain profile. 283 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03633 490 SUPERFAMILY Protein kinase-like (PK-like) 267 487 IPR011009 -
Vivi1g03633 490 Gene3D Transferase(Phosphotransferase) domain 1 358 489 - -
Vivi1g03633 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Vivi1g03633 490 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Vivi1g03633 490 PANTHER RUST RESISTANCE KINASE LR10-RELATED 254 488 IPR045874 GO:0004672
Vivi1g03633 490 SMART serkin_6 283 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03633 490 Gene3D Phosphorylase Kinase; domain 1 256 357 - -
Vivi1g03633 490 FunFam Os07g0541700 protein 358 449 - -
Vivi1g03633 490 Pfam Protein kinase domain 286 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03633 490 FunFam serine/threonine-protein kinase PBS1-like 251 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03633 Vivi-Chr1 78058842 78060927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03633 8 490 Receptor kinase-like Gene Family AT5G38260 37.524 3.04e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi1g03633 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03633 - - vvo:131610174 1015.37