Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03630 ATGATCCAACTGGAGGAGAATGCAAGAATCACAGAGCTAACTGGCTCCGTTGACCAGAATACCATTACACTTTCTGATCAAGATTTTTATACGCGTTTGCAAAGTAACGTTTGTGACACTTTGAATCGCAGTTACCCTCTTCCTCCCCCTTCTCCTTTGGTTTCTTTTTATATAAACAGTAATGTAACTCTCTTCCGATGCAATCGCAGCCACAATATCAACCCCCCTGCACAATATTTTAAATACCCATGTCCTTCCTATGATATCTATTATAATAGGAATCTATATCCAAATGATACTAAAGAAAATGCGCATAGCCTTTTCTCATCCTGCTTGGTTCTTCAATTTCCATCTAAAGACTTGACTGATACCAAAAACATTTTATCATTTGTATCTGGTCAGTTGAGTGTTAAAATAGAATTATCTGCTGATTGTGAAGAGTGCAGCAACAACAGTGGAGGCCAATGTAGACTTAATGCAAACAATAAGTTCTACTGTCATAATGTAACGGATACAAAGAAAAAGGGACTGATCTGGAGAGTCAAACTGGGTATAGGAGCCATGGGGGTGGTTATTGGAATTGCAGTGCTGATTTTATTGGCTTATGCGATTAGGAAAAATATCTTTCCTCGGGCACTTCCTTTGTTTAGGAAGGAGAGTTCAACCCATCAAAATATTAAGGAATTCTTGAAAGAACAAGGACCTCTTCTTGCTGCGAGGTACAATTATTTAGATGTCAAGAAAATAACTAACTCTTTTAAAAGTAAATTAGGCCAGGGAGGATACGGAAGTGTATATAAAGGGAAGTTACATGATGACCGTATGGTTGCAGTGAAGGTTTTAAGTGAATCCAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCGAGTATAAGTAGAACTTCGCATGTTAATGTTGTTAGACTTTTGGGGTTTTGTTTGGATGGTTCTAAAAAGGCACTGATATATGAGTTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAAACCCAGTGCGTGTTGGTCTCCAATTGAATTGCAAAACATTGTATGATATTGCACTTGGTGTTGCTCGTGGATTAGAGTATTTGCATAGAGGCTGTAACACTAGAATCTTGCATTTTGACATAAAGCCTCATAATATATTACTAGATGAGGATTTTTGTCCAAAAATTTCTGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAAAGCATTGTATCCATATTTGGCGCAAGGGGAACACCCGGATATATTGCTCCTGAGTTGTTTTCTCGAAGTTTTGGTAATGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTAGAGATGGTTGGACGAAGAAAGAACATTAAGATTGAAGTTGATTGTTCTAGTGAGTTATACTTTCCACATTGGATTTACAAGCGTCTTGAATTGAATCTGGACCTTGGACTTAAGTGCATTAAAAATGAAATTGATGAAGAAATGGTAAGGAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCAGTCCTTCGAATCGACCATCAATGCATAAAGTGGTGGAAATGTTGGAAGGGAACCTTCAAGTGTTGGAAATGCCACCCAAACCCTTTCTATCCTCTCCTTCAACATCTCCAACCCATTTATCATCTGAAATATTGTAA 1671 0.3734 MIQLEENARITELTGSVDQNTITLSDQDFYTRLQSNVCDTLNRSYPLPPPSPLVSFYINSNVTLFRCNRSHNINPPAQYFKYPCPSYDIYYNRNLYPNDTKENAHSLFSSCLVLQFPSKDLTDTKNILSFVSGQLSVKIELSADCEECSNNSGGQCRLNANNKFYCHNVTDTKKKGLIWRVKLGIGAMGVVIGIAVLILLAYAIRKNIFPRALPLFRKESSTHQNIKEFLKEQGPLLAARYNYLDVKKITNSFKSKLGQGGYGSVYKGKLHDDRMVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNPVRVGLQLNCKTLYDIALGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRSFGNVSHKSDVYSYGMMVLEMVGRRKNIKIEVDCSSELYFPHWIYKRLELNLDLGLKCIKNEIDEEMVRKMTVVSLWCIQTSPSNRPSMHKVVEMLEGNLQVLEMPPKPFLSSPSTSPTHLSSEIL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03630 556 SUPERFAMILY Protein kinase-like (PK-like) 235 527 IPR011009 -
Vivi1g03630 556 FunFam serine/threonine-protein kinase PBS1-like 218 325 - -
Vivi1g03630 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Vivi1g03630 556 PANTHER RUST RESISTANCE KINASE LR10-RELATED 222 544 IPR045874 GO:0004672
Vivi1g03630 556 Pfam Protein kinase domain 254 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03630 556 SMART serkin_6 251 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03630 556 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Vivi1g03630 556 FunFam PR5-like receptor kinase 326 538 - -
Vivi1g03630 556 Gene3D Phosphorylase Kinase; domain 1 222 325 - -
Vivi1g03630 556 Gene3D Transferase(Phosphotransferase) domain 1 326 535 - -
Vivi1g03630 556 ProSiteProfiles Protein kinase domain profile. 251 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03630 Vivi-Chr1 78030532 78033889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03630 139 553 Receptor kinase-like Gene Family AT1G66910 49.652 4.83e-130 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi1g03630 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03630 - - vvo:131610157 1074.69