Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03626 ATGTTAACCATACACGGTTGCGATGACCCCGAACCACAATCCACAAAAAGTATTCAAAATAACAATAGATGGTTCAATATACTCGAAATCGAACCCTTCACAATCACAATTCGAGATGACCAACTCCACGATTTATTGCAACAGAAAAGCTGCAAAATTCTTAACTTCAATTCTATGTTTACTGTCAACACGCCTTTGGTTTCATCTCGTTTACAAAATTATGTAACCGTTTTCGGATGTAGCAACATCCACAACACAACTGATCTTCAACAGTACTATTCTTCTGTTTCTAATAATACTTCTATCTGTGTAAACCCGTATGCCAGTAATGAAACTATTGTGGTTGTAACTGATTCCACCACTTTCAACTCTAGTCATCTCAAAGGATGTTCAAAGGTGGAGCTTCCAACTAAATATGAAGTTCCGCGTGTTGATCCAGAAGATCTTTTTTACTTCTTAATTGCTGATGTTGCAATCAAATTACAAGTTTCTCAAGATTGTTCTACTTGTCATGATCTTGATGGAGGTCAATGTCGTCTTGATACCAAAGGACAGTTTTATTGTCACCAAGGGAAATCTAATAAGACCCTTCTAATAGTCACAACAGTTGCATCTTCTATTGGAGTACTTGGAGTTCTAGCTTTATTGGCTTGGTTCTTGAGAAGGCGTTTTATCAGCAACAAAAACTCACCATACCAAATAATTGAATTGTTTCTGAAAAACCATGGTCATCTAGCCGCTAAAAGATACACTTATACAGATATAAAAAAAGCAACAAATTCATTAAAAAACAAACTAGGTCACGGAGGATATGGAAGTGTATACAAAGGAAAATTACAAGATGGGAGTCTCGTGGCAGTAAAGGTATTAAGTGAATCCAATGGTAACGGTGAAGAATTCATTAACGAGGTTGCTAGTATCAGTGTCACATCTCATGTTAATATCGTTAGTTTATTGCGATTCTGTTTAGAAGGTTCGAAAAGAGCTTTGATATATGACTACTTGCCTAACGGATCACTAGAAAAGTTCATAAATGAAGACAAAGATCCACTAAAGCGAAGTTTTCCATTGAGTTGCAATACTATCTACAATATTGCAATAGGCGTTGCTCGAGGATTAGAGTATTTGCACAAGGGTTGCAATACTAAAATCTTGCATTTTGATATAAAACCTCATAATATATTGCTTGATGGTGATTTTTGTCCTAAAATTTCAGATTTTGGACTTGCAAAAGTATGTGCGAGAAAAGAAAGTATTATATCTTTATTGGGTGCTAGAGGGACTGCGGGATACATTGCTCCTGAAGTGTTCTCTAGAAATTTCGGTTCAGTTTCTCACAAGTCTGATGTATATAGCTATGAAATGATGGTTTTAGAAATGGTTGGTGGAAAACACAATAACAGTACGGTTGATGTTGAACGGTCAAATGCCAAAGTTAAGCATTTAGTTCATCCTTCATAG 1461 0.3593 MLTIHGCDDPEPQSTKSIQNNNRWFNILEIEPFTITIRDDQLHDLLQQKSCKILNFNSMFTVNTPLVSSRLQNYVTVFGCSNIHNTTDLQQYYSSVSNNTSICVNPYASNETIVVVTDSTTFNSSHLKGCSKVELPTKYEVPRVDPEDLFYFLIADVAIKLQVSQDCSTCHDLDGGQCRLDTKGQFYCHQGKSNKTLLIVTTVASSIGVLGVLALLAWFLRRRFISNKNSPYQIIELFLKNHGHLAAKRYTYTDIKKATNSLKNKLGHGGYGSVYKGKLQDGSLVAVKVLSESNGNGEEFINEVASISVTSHVNIVSLLRFCLEGSKRALIYDYLPNGSLEKFINEDKDPLKRSFPLSCNTIYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDGDFCPKISDFGLAKVCARKESIISLLGARGTAGYIAPEVFSRNFGSVSHKSDVYSYEMMVLEMVGGKHNNSTVDVERSNAKVKHLVHPS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03626 486 Gene3D Phosphorylase Kinase; domain 1 239 334 - -
Vivi1g03626 486 SUPERFAMILY Protein kinase-like (PK-like) 245 474 IPR011009 -
Vivi1g03626 486 ProSiteProfiles Protein kinase domain profile. 260 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03626 486 FunFam serine/threonine-protein kinase PBS1-like 236 334 - -
Vivi1g03626 486 PANTHER RUST RESISTANCE KINASE LR10-RELATED 233 474 IPR045874 GO:0004672
Vivi1g03626 486 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Vivi1g03626 486 SMART serkin_6 260 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03626 486 FunFam Os07g0541700 protein 335 427 - -
Vivi1g03626 486 Pfam Protein kinase domain 263 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03626 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Vivi1g03626 486 Gene3D Transferase(Phosphotransferase) domain 1 335 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03626 Vivi-Chr1 77978235 77980108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03626 154 465 Receptor kinase-like Gene Family AT5G38260 50.470 3.51e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi1g03626 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03626 - - vvo:131646658 979.548